Miyakogusa Predicted Gene

Lj3g3v3701220.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3701220.1 Non Chatacterized Hit- tr|J3MEJ3|J3MEJ3_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=OB06G2,28.57,0.006,
,86947_g.1
         (250 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75327                                                      446   e-125

>gnl|LJGI|TC75327 
          Length = 742

 Score =  446 bits (225), Expect = e-125
 Identities = 242/250 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcaaggctcaagaagtttgtccgtgcactatgatattgctgcaatgtctagatcatca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atgcaaggctcaagaagtttgtccgtgcactatgatattgctgcaatgtctagatcatca 385

                                                                       
Query: 61  caagagtatactactctgcgcaatgactgggatctcattcccgcttctcggtttgaggct 120
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 386 caagagtatactactctgcgcaatgactgggatcccattcccgcttctcggtttgaggct 445

                                                                       
Query: 121 ataaactatgctgcattgttgcaaattgcctgggatgtcttgatagctgaggattatgat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ataaactatgctgcattgttgcaaattgcctgggatgtcttgatagctgaggattatgat 505

                                                                       
Query: 181 ttatatatagatggtgaactctttttcaaagnnnnnnncaacgttcaaaatcctggtgac 240
           |||||||||||||||||||||||||||||||       ||||||||||||||||||||||
Sbjct: 506 ttatatatagatggtgaactctttttcaaagtttttttcaacgttcaaaatcctggtgac 565

                     
Query: 241 gagtggcctt 250
           ||||||||||
Sbjct: 566 gagtggcctt 575