Miyakogusa Predicted Gene
- Lj3g3v3700170.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3700170.3 tr|G7IWS3|G7IWS3_MEDTR Actin related protein
OS=Medicago truncatula GN=MTR_3g030550 PE=3 SV=1,92.75,0,Actin-like
ATPase domain,NULL; Actin,Actin-like; ACTIN-RELATED PROTEIN,NULL;
ACTIN,Actin-like; no de,CUFF.46358.3
(588 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67999 similar to UniRef100_A7Q282 Cluster: Chromosome... 1166 0.0
gnl|LJGI|BP054187 similar to UniRef100_A7Q282 Cluster: Chromosom... 593 e-169
gnl|LJGI|GO012863 similar to UniRef100_A7Q282 Cluster: Chromosom... 591 e-168
gnl|LJGI|TC58394 similar to UniRef100_A7Q282 Cluster: Chromosome... 226 1e-58
gnl|LJGI|BP085427 homologue to UniRef100_Q0WW62 Cluster: Actin-l... 133 1e-30
>gnl|LJGI|TC67999 similar to UniRef100_A7Q282 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (97%)
Length = 1457
Score = 1166 bits (588), Expect = 0.0
Identities = 588/588 (100%)
Strand = Plus / Plus
Query: 1 atggatctaactaatttcctggctcaagaacttggcaagtccaatcctctagtaaatatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 atggatctaactaatttcctggctcaagaacttggcaagtccaatcctctagtaaatatc 611
Query: 61 agcctgtctgatgtggagaaaataaaagagcaatactcatgctgtgctgaagatgaatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 agcctgtctgatgtggagaaaataaaagagcaatactcatgctgtgctgaagatgaatta 671
Query: 121 gcttatcagaagaccgaacatttttgtcctgtggagaaacatacccttcctgatggacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gcttatcagaagaccgaacatttttgtcctgtggagaaacatacccttcctgatggacag 731
Query: 181 gtgataacaattgggagagaaagatatactgttggtgaagctttattccagccaagtctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 gtgataacaattgggagagaaagatatactgttggtgaagctttattccagccaagtctg 791
Query: 241 ttgggtttagatgctcatggcattgttgagcagcttgtccgaactatttcaactgtatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 ttgggtttagatgctcatggcattgttgagcagcttgtccgaactatttcaactgtatca 851
Query: 301 tctgataatcatcggcagcttctagaaaatacggtggtttgtggtggcacttcttctatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 tctgataatcatcggcagcttctagaaaatacggtggtttgtggtggcacttcttctatg 911
Query: 361 acaggttttgaagacagatttcagaaggaatctaacttaagttcatccgcggttcaacct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 acaggttttgaagacagatttcagaaggaatctaacttaagttcatccgcggttcaacct 971
Query: 421 acccttgttaagcctccagagtacatgccagaaaatttaaccatgtattcagcatgggtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972 acccttgttaagcctccagagtacatgccagaaaatttaaccatgtattcagcatgggtg 1031
Query: 481 ggaggtgccatacttgcaaaagtagttttccctcaaaatcagcatataactaaggcagac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1032 ggaggtgccatacttgcaaaagtagttttccctcaaaatcagcatataactaaggcagac 1091
Query: 541 tatgatgaaaccggaccttccattgttcatcggaaatgcttctgacag 588
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1092 tatgatgaaaccggaccttccattgttcatcggaaatgcttctgacag 1139
>gnl|LJGI|BP054187 similar to UniRef100_A7Q282 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 525
Score = 593 bits (299), Expect = e-169
Identities = 361/382 (94%), Gaps = 5/382 (1%)
Strand = Plus / Minus
Query: 49 ctagtaaatatcagcctgtctgatgtggagaaaataaaagagcaatactcatgctgtgct 108
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 525 ctagtaaatatcagcctgtctgatgtggagaaaataaaagagcnatactcatgctgtgct 466
Query: 109 gaagatgaattagcttatcagaagaccgaacatttttgtcctgtggagaaacataccctt 168
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 465 gaagatgaattagcttatcagaagactgaac-----tgtcctgtggagaaacataccctt 411
Query: 169 cctgatggacaggtgataacaattgggagagaaagatatactgttggtgaagctttattc 228
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 410 cctgatggacaggtgataacaattgggagagaaagatacactgttggtgaagccttattc 351
Query: 229 cagccaagtctgttgggtttagatgctcatggcattgttgagcagcttgtccgaactatt 288
||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |
Sbjct: 350 cagtcaagtctgttgggtttagaggctcatggcattgttgagcagcttgtcagaactagt 291
Query: 289 tcaactgtatcatctgataatcatcggcagcttctagaaaatacggtggtttgtggtggc 348
||||||||||||||||||||||| |||||||| ||||||||||| ||||| |||||||||
Sbjct: 290 tcaactgtatcatctgataatcaccggcagctgctagaaaatactgtggtgtgtggtggc 231
Query: 349 acttcttctatgacaggttttgaagacagatttcagaaggaatctaacttaagttcatcc 408
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 230 acttcttctatgacaggttttgaagagagatttcagaaggaatctaacttaagttcatca 171
Query: 409 gcggttcaacctacccttgtta 430
| |||||||||||||||||||
Sbjct: 170 actgttcaacctacccttgtta 149
>gnl|LJGI|GO012863 similar to UniRef100_A7Q282 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 726
Score = 591 bits (298), Expect = e-168
Identities = 349/366 (95%), Gaps = 5/366 (1%)
Strand = Plus / Plus
Query: 1 atggatctaactaatttcctggctcaagaacttggcaagtccaatcctctagtaaatatc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 236 atggatctaactaatttcctggctcaagaacttggcaagtccaatccactagtaaatatc 295
Query: 61 agcctgtctgatgtggagaaaataaaagagcaatactcatgctgtgctgaagatgaatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 agcctgtctgatgtggagaaaataaaagagcaatactcatgctgtgctgaagatgaatta 355
Query: 121 gcttatcagaagaccgaacatttttgtcctgtggagaaacatacccttcctgatggacag 180
|||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 356 gcttatcagaagactgaac-----tgtcctgtggagaaacatacccttcctgatggacag 410
Query: 181 gtgataacaattgggagagaaagatatactgttggtgaagctttattccagccaagtctg 240
|||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||
Sbjct: 411 gtgataacaattgggagagaaagatacactgttggtgaagccttattccagtcaagtctg 470
Query: 241 ttgggtttagatgctcatggcattgttgagcagcttgtccgaactatttcaactgtatca 300
||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 471 ttgggtttagaggctcatggcattgttgagcagcttgtcagaactagttcaactgtatca 530
Query: 301 tctgataatcatcggcagcttctagaaaatacggtggtttgtggtggcacttcttctatg 360
||||||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 531 tctgataatcaccggcagctgctagaaaatactgtggtgtgtggtggcacttcttctatg 590
Query: 361 acaggt 366
||||||
Sbjct: 591 acaggt 596
>gnl|LJGI|TC58394 similar to UniRef100_A7Q282 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (64%)
Length = 900
Score = 226 bits (114), Expect = 1e-58
Identities = 171/190 (90%)
Strand = Plus / Plus
Query: 4 gatctaactaatttcctggctcaagaacttggcaagtccaatcctctagtaaatatcagc 63
||||| |||||||| ||||| |||||||||||||| |||||||| ||||| |||||||||
Sbjct: 711 gatctcactaattttctggcacaagaacttggcaaatccaatccgctagtgaatatcagc 770
Query: 64 ctgtctgatgtggagaaaataaaagagcaatactcatgctgtgctgaagatgaattagct 123
|||||||||| |||||||||||| ||||||||||||| || ||||||||||| ||||||
Sbjct: 771 atgtctgatgttgagaaaataaaacagcaatactcatgttgcgctgaagatgatttagct 830
Query: 124 tatcagaagaccgaacatttttgtcctgtggagaaacatacccttcctgatggacaggtg 183
|||||||||||| || ||| ||| |||| ||||| |||||||||||||||||||||||||
Sbjct: 831 tatcagaagacccaagattcttgccctgcggagacacatacccttcctgatggacaggtg 890
Query: 184 ataacaattg 193
|| |||||||
Sbjct: 891 atcacaattg 900
>gnl|LJGI|BP085427 homologue to UniRef100_Q0WW62 Cluster: Actin-like protein; n=1;
Arabidopsis thaliana|Rep: Actin-like protein -
Arabidopsis thaliana (Mouse-ear cress), partial (21%)
Length = 343
Score = 133 bits (67), Expect = 1e-30
Identities = 89/95 (93%), Gaps = 1/95 (1%)
Strand = Plus / Minus
Query: 466 tattcagcatgggtgggaggtgccatacttgcaaaagtagttttccctcaaaatcagcat 525
||||| |||||||||||||||| ||| ||||||||||||||||||||||||||| |||||
Sbjct: 343 tattctgcatgggtgggaggtgtcatccttgcaaaagtagttttccctcaaaatgagcat 284
Query: 526 ataactaaggcagactatgatgaaaccggaccttc 560
|||||| |||| |||||||||||||||||||||||
Sbjct: 283 ataact-aggccgactatgatgaaaccggaccttc 250