Miyakogusa Predicted Gene
- Lj3g3v3690060.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3690060.2 Non Chatacterized Hit- tr|I1L5M9|I1L5M9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.12975
PE,74.17,0,ZF_PHD_2,Zinc finger, PHD-finger; SUBFAMILY NOT NAMED,NULL;
HISTONE ACETYLTRANSFERASE,NULL; seg,NULL,CUFF.46347.2
(2583 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76254 similar to UniRef100_A7Q276 Cluster: Chromosome... 1068 0.0
gnl|LJGI|AV419205 similar to UniRef100_Q05QX8 Cluster: Photosyst... 747 0.0
gnl|LJGI|TC66894 weakly similar to UniRef100_A7Q276 Cluster: Chr... 537 e-151
gnl|LJGI|TC74632 172 7e-42
>gnl|LJGI|TC76254 similar to UniRef100_A7Q276 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 625
Score = 1068 bits (539), Expect = 0.0
Identities = 539/539 (100%)
Strand = Plus / Plus
Query: 1 atggcatttcacctcgcatgtccaattacatgtcgccgaatctgcttctgttcgttaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 atggcatttcacctcgcatgtccaattacatgtcgccgaatctgcttctgttcgttaggg 146
Query: 61 tttccgcgctctcttcccgacgcgaatgcttttctcaacgacgtcgctttgctcaccgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 tttccgcgctctcttcccgacgcgaatgcttttctcaacgacgtcgctttgctcaccgac 206
Query: 121 ttcatttccgccggaaccaccgccaatgatgccaccgccaccgtccaggtcgctgtcccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ttcatttccgccggaaccaccgccaatgatgccaccgccaccgtccaggtcgctgtcccc 266
Query: 181 aaggttgtgccgccaccgcctgaagctctccccgttgctggtggtgacgcgcttgatgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aaggttgtgccgccaccgcctgaagctctccccgttgctggtggtgacgcgcttgatgaa 326
Query: 241 tccgcctccatgaaggccaagcgcgtcgcgctccagcgtaagggcgccgccgctatgatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tccgcctccatgaaggccaagcgcgtcgcgctccagcgtaagggcgccgccgctatgatc 386
Query: 301 gccgctgaggagtacgctcgccgctttgagtccggcgatgtcctggatacgccggggagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gccgctgaggagtacgctcgccgctttgagtccggcgatgtcctggatacgccggggagt 446
Query: 361 gttactggagaagaactgggacaatccaatgtgaaggtcttttgtcggatgtgcaatcgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gttactggagaagaactgggacaatccaatgtgaaggtcttttgtcggatgtgcaatcgt 506
Query: 421 gttgagaatgaagggagtgagagggcgaagaagatgctgtcttgtaagagctgtagtaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gttgagaatgaagggagtgagagggcgaagaagatgctgtcttgtaagagctgtagtaag 566
Query: 481 aaataccataggacctgcttgaaaagttgggctcaaaatagagatttatttcattggag 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 aaataccataggacctgcttgaaaagttgggctcaaaatagagatttatttcattggag 625
>gnl|LJGI|AV419205 similar to UniRef100_Q05QX8 Cluster: Photosystem II
stability/assembly factor-like protein; n=1;
Synechococcus sp. RS9916|Rep: Photosystem II
stability/assembly factor-like protein - Synechococcus
sp. RS9916, partial (5%)
Length = 380
Score = 747 bits (377), Expect = 0.0
Identities = 377/377 (100%)
Strand = Plus / Plus
Query: 1690 gataattcaagctgccaaagagatcaagatctggttactgttaatggaaatgaaaatata 1749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gataattcaagctgccaaagagatcaagatctggttactgttaatggaaatgaaaatata 63
Query: 1750 agccatttgaggaaaggagacaagtatgcattagatagacccgatgggacaggaatactt 1809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 agccatttgaggaaaggagacaagtatgcattagatagacccgatgggacaggaatactt 123
Query: 1810 gttgatggcaaaggtaacagagttgattctggccaatcaaaaatttcaaaggcttcaggg 1869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gttgatggcaaaggtaacagagttgattctggccaatcaaaaatttcaaaggcttcaggg 183
Query: 1870 agagaggggaattttattaagctgggaaaagttaagcctggtgcttctcaatttaacttg 1929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 agagaggggaattttattaagctgggaaaagttaagcctggtgcttctcaatttaacttg 243
Query: 1930 acccctagtagaggcaaaatgtctgatgggggtgaaattgttcctttagagcgttctctc 1989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 acccctagtagaggcaaaatgtctgatgggggtgaaattgttcctttagagcgttctctc 303
Query: 1990 atctcgaggggaaaacgttgcactgatggaattactggtcaagttggaaaagaggctaca 2049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 atctcgaggggaaaacgttgcactgatggaattactggtcaagttggaaaagaggctaca 363
Query: 2050 tcaagaggtgaaaggac 2066
|||||||||||||||||
Sbjct: 364 tcaagaggtgaaaggac 380
>gnl|LJGI|TC66894 weakly similar to UniRef100_A7Q276 Cluster: Chromosome chr13
scaffold_45, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_45, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 735
Score = 537 bits (271), Expect = e-151
Identities = 271/271 (100%)
Strand = Plus / Plus
Query: 2313 cgatacaagtcaatcacatcaagaccgtgtaatggatgagatcatggatgccaactggat 2372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgatacaagtcaatcacatcaagaccgtgtaatggatgagatcatggatgccaactggat 60
Query: 2373 attgatgaagctgggtaatgatgcagttggaaagagagttgaagttcatcaggcatctga 2432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attgatgaagctgggtaatgatgcagttggaaagagagttgaagttcatcaggcatctga 120
Query: 2433 caatacttggcacaaaggagtagttactgaagtagttgaaggcacttcaaagttgcatgt 2492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caatacttggcacaaaggagtagttactgaagtagttgaaggcacttcaaagttgcatgt 180
Query: 2493 taccttagatgaaggtagggtggatatctgcgatctcaaaaagcagggggttcgttttgt 2552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taccttagatgaaggtagggtggatatctgcgatctcaaaaagcagggggttcgttttgt 240
Query: 2553 tcctcataagcaaaagagatcaaagacatga 2583
|||||||||||||||||||||||||||||||
Sbjct: 241 tcctcataagcaaaagagatcaaagacatga 271
>gnl|LJGI|TC74632
Length = 554
Score = 172 bits (87), Expect = 7e-42
Identities = 93/95 (97%)
Strand = Plus / Plus
Query: 2489 atgttaccttagatgaaggtagggtggatatctgcgatctcaaaaagcagggggttcgtt 2548
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgttaccttagatgaagttagggtggatatctgcgatctcaaaaagcagggggttcgtt 60
Query: 2549 ttgttcctcataagcaaaagagatcaaagacatga 2583
||||||||||||||| |||||||||||||||||||
Sbjct: 61 ttgttcctcataagccaaagagatcaaagacatga 95