Miyakogusa Predicted Gene
- Lj3g3v3689900.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3689900.1 tr|G7IKW7|G7IKW7_MEDTR SNW domain-containing
protein OS=Medicago truncatula GN=MTR_2g030450 PE=4
SV=,86.46,0,seg,NULL; coiled-coil,NULL; SKIP_SNW,SKI-interacting
protein SKIP, SNW domain; NUCLEAR PROTEIN SKIP-,CUFF.46200.1
(1813 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69960 similar to UniRef100_Q3I4X9 Cluster: GAMYB-bind... 1570 0.0
gnl|LJGI|TC62820 homologue to UniRef100_Q3I4X9 Cluster: GAMYB-bi... 1078 0.0
gnl|LJGI|TC82121 similar to UniRef100_Q3I4X9 Cluster: GAMYB-bind... 642 0.0
gnl|LJGI|AV767709 homologue to UniRef100_Q3I4X9 Cluster: GAMYB-b... 307 1e-82
gnl|LJGI|GO025383 similar to UniRef100_Q3I4X9 Cluster: GAMYB-bin... 270 3e-71
>gnl|LJGI|TC69960 similar to UniRef100_Q3I4X9 Cluster: GAMYB-binding protein; n=1;
Glycine max|Rep: GAMYB-binding protein - Glycine max
(Soybean), partial (42%)
Length = 858
Score = 1570 bits (792), Expect = 0.0
Identities = 798/800 (99%)
Strand = Plus / Plus
Query: 1 atggccgcgttgaatgagcttcttcctcaaccgaaatcatcttccgccacttactacgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 atggccgcgttgaatgagcttcttcctcaaccgaaatcatcttccgccacttactacgac 118
Query: 61 cacagcaatgacccatggttcaagcagaggttcacctcgtcagaggaagaaaaggcctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 cacagcaatgacccatggttcaagcagaggttcacctcgtcagaggaagaaaaggcctct 178
Query: 121 gctgcgatcaagcagaagcaggtgccgccatacctgaagcgcgccggttttgttccccga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 gctgcgatcaagcagaagcaggtgccgccatacctgaagcgcgccggttttgttccccga 238
Query: 181 agggttgaggatttcggggatggcggagcattccctgagattcatgtggcacagtaccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 agggttgaggatttcggggatggcggagcattccctgagattcatgtggcacagtaccct 298
Query: 241 cttgacatgggaagggacaagtcatcaaaacccggttccaagattcttcctgtgaccgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 cttgacatgggaagggacaagtcatcaaaacccggttccaagattcttcctgtgaccgtc 358
Query: 301 gacgctcacgggaatgttgcctatgatgccatagtgaagcagaatgagaacgctaagaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gacgctcacgggaatgttgcctatgatgccatagtgaagcagaatgagaacgctaagaaa 418
Query: 361 atcgtgtacacgcagcagaaggatctaataccgaagatattgaagaacgaagaagaatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 atcgtgtacacgcagcagaaggatctaataccgaagatattgaagaacgaagaagaatat 478
Query: 421 ggtgacatggatgaggatgaggatgtgcagaaagagattgatgaaaccatgcaggaaact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ggtgacatggatgaggatgaggatgtgcagaaagagattgatgaaaccatgcaggaaact 538
Query: 481 aaagctgctcttgagaagatagttaatgtgagactcagtgcggcgcagcctaaaaatgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 aaagctgctcttgagaagatagttaatgtgagactcagtgcggcgcagcctaaaaatgtt 598
Query: 541 cccaagcaatcctctgatgctaagtatatcaagtacaagccttcacagcaaagcgcagct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 cccaagcaatcctctgatgctaagtatatcaagtacaagccttcacagcaaagcgcagct 658
Query: 601 ttcaattcgggggcaaaggagagggtgattaggatgatggagatgcccgtggatccgctc 660
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ttcaatacgggggcaaaggagagggtgattaggatgatggagatgcccgtggatccgctc 718
Query: 661 gagcctccaaagtttaagcataagcgtgttcctaaggcttctggctcccctccggtgcca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 gagcctccaaagtttaagcataagcgtgttcctaaggcttctggctcccctccggtgcca 778
Query: 721 gtgatgcattcacctccgaggcctgttactgtgaaggatcagcaagattggaagataccc 780
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 gtgatgcattcaccttcgaggcctgttactgtgaaggatcagcaagattggaagataccc 838
Query: 781 ccttgcatttcaaattggaa 800
||||||||||||||||||||
Sbjct: 839 ccttgcatttcaaattggaa 858
>gnl|LJGI|TC62820 homologue to UniRef100_Q3I4X9 Cluster: GAMYB-binding protein; n=1;
Glycine max|Rep: GAMYB-binding protein - Glycine max
(Soybean), partial (33%)
Length = 999
Score = 1078 bits (544), Expect = 0.0
Identities = 566/572 (98%), Gaps = 1/572 (0%)
Strand = Plus / Plus
Query: 1243 ttggaggctaaggatgctgcaatggggaagaagagcaagatcacaagagatagggatcgt 1302
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 32 ttggaggctaaggatgctgcaatgggaaagaagagtaagatcacaagagatagggatcgt 91
Query: 1303 gatataagtgagaaagttgctcttggtatggctactgcaaagacagggacagaggtcatg 1362
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 92 gatataagtgagaaagttgctcttggtatggctactgctaagacagggacagaggtcatg 151
Query: 1363 tatgatga-acggctattcaaccaggataaagggatgtcatctgggtttggcactgatga 1421
|||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 152 tatgatgagacggctattcaaccaggatcaagggatgtcatctgggtttggcactgatga 211
Query: 1422 tcagtataatgtgtatgacaaaggcttgtttactgcgcagccaacactctcaaccctgta 1481
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 212 tcagtataatgtgtatgacaaaggcttgtttactgctcagccaacactctcaaccctgta 271
Query: 1482 taggccaaagaaggatgttgataacgagacttatggaggtgccgatgaacagctagagaa 1541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 taggccaaagaaggatgttgataacgagacttatggaggtgccgatgaacagctagagaa 331
Query: 1542 gattatgaagactgatcgctttaagccagacaaagcattttcaggtgcttctgaaagggc 1601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gattatgaagactgatcgctttaagccagacaaagcattttcaggtgcttctgaaagggc 391
Query: 1602 aggtccaagggataggccggttgaatttgagaatgaagaagctgatccatttggtctgga 1661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 aggtccaagggataggccggttgaatttgagaatgaagaagctgatccatttggtctgga 451
Query: 1662 tcagttcttgacagaggtcaagaagggtaagaaggccatggagaaagtgggtggtggagg 1721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tcagttcttgacagaggtcaagaagggtaagaaggccatggagaaagtgggtggtggagg 511
Query: 1722 aactatgaaagcaagtgctggatcttcaatgagggatggttacgagggaggttctagtag 1781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 aactatgaaagcaagtgctggatcttcaatgagggatggttacgagggaggttctagtag 571
Query: 1782 gactcgcattggatttgaaaggggacattgag 1813
||||||||||||||||||||||||||||||||
Sbjct: 572 gactcgcattggatttgaaaggggacattgag 603
>gnl|LJGI|TC82121 similar to UniRef100_Q3I4X9 Cluster: GAMYB-binding protein; n=1;
Glycine max|Rep: GAMYB-binding protein - Glycine max
(Soybean), partial (31%)
Length = 837
Score = 642 bits (324), Expect = 0.0
Identities = 524/590 (88%), Gaps = 3/590 (0%)
Strand = Plus / Plus
Query: 1 atggccgcgttgaatgagcttcttcctcaaccgaaatcatcttccgccacttactacgac 60
||||| || ||||| |||||||| |||||||| |||||||||||| ||||||||||||||
Sbjct: 250 atggcagctttgaaagagcttctccctcaacccaaatcatcttccaccacttactacgac 309
Query: 61 cacagcaatgacccatggttcaagcagaggttcacctcgtcagaggaagaaaaggcctct 120
|||||||| || |||||||||||||||||||||||||| || ||||| |||||||||||
Sbjct: 310 cacagcaacgatccatggttcaagcagaggttcacctcatcggaggaggaaaaggcctcc 369
Query: 121 gctgcgatcaagcagaagcaggtgccgccatacctgaagcgcgccggttttgttccccga 180
||||||||||||||||||| ||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 370 gctgcgatcaagcagaagccggtgccgccatacctcaagcgcgccggcttcgttcctcgc 429
Query: 181 agggttgaggatttcggggatggcggagcattccctgagattcatgtggcacagtaccct 240
|| || |||||||||||||| |||||||| ||||| || || || || |||||||| |||
Sbjct: 430 agagtcgaggatttcggggacggcggagccttccccgaaatccacgtcgcacagtatcct 489
Query: 241 cttgacatgggaagggacaagtcatcaaaacccggttccaagattcttcctgtgaccgtc 300
|| |||||||||||||| || || || ||| |||||||||||||||| || || || ||
Sbjct: 490 ctcgacatgggaagggataaatcctcgaaaaccggttccaagattctgccagtaactgtt 549
Query: 301 gacgctcacgggaatgttgcctatgatgccatagtgaagcagaatgagaacgctaagaaa 360
|| || || ||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 550 gatgcgcatgggaatgttgcttatgatgccatagtgaagcagaatgagaatgctaagaaa 609
Query: 361 atcgtgtacacgcagcagaaggatctaataccgaagatattgaagaacgaagaagaatat 420
|| ||||||||||||||||||||| | ||||||||||| |||||||| |||||||| ||
Sbjct: 610 attgtgtacacgcagcagaaggatttgataccgaagattttgaagaatgaagaagatgat 669
Query: 421 ggtgacatggatgaggatgaggatgtgcagaaagagattgatgaaaccatgcaggaaact 480
|| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 670 ggg---atggatgaggatgaggatgtgcagaaagagattgaggaaaccatgcaggaaact 726
Query: 481 aaagctgctcttgagaagatagttaatgtgagactcagtgcggcgcagcctaaaaatgtt 540
||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||
Sbjct: 727 aaagctgctcttgagaagatagttaatgtcagactcagtgcggcgcagccgaagaatgtt 786
Query: 541 cccaagcaatcctctgatgctaagtatatcaagtacaagccttcacagca 590
|||||||||| || ||| | |||||||| |||||||||||||| |||||
Sbjct: 787 gccaagcaatcatcggattcgaagtatattaagtacaagccttcgcagca 836
>gnl|LJGI|AV767709 homologue to UniRef100_Q3I4X9 Cluster: GAMYB-binding protein; n=1;
Glycine max|Rep: GAMYB-binding protein - Glycine max
(Soybean), partial (10%)
Length = 540
Score = 307 bits (155), Expect = 1e-82
Identities = 182/191 (95%)
Strand = Plus / Minus
Query: 1620 ggttgaatttgagaatgaagaagctgatccatttggtctggatcagttcttgacagaggt 1679
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 540 ggttgagtttgagaatgaagaagctgatccatttggtctggatcagttcttgacggaggt 481
Query: 1680 caagaagggtaagaaggccatggagaaagtgggtggtggaggaactatgaaagcaagtgc 1739
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 480 gaagaagggtaagaaggccatggagaaagtgggcggtggaggaactatgaaagcaagtgc 421
Query: 1740 tggatcttcaatgagggatggttacgagggaggttctagtaggactcgcattggatttga 1799
|||||||||||| |||| ||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 420 cggatcttcaatgcgggacggttatgagggaggttcgagtaggactcgcattggatttga 361
Query: 1800 aaggggacatt 1810
|||||||||||
Sbjct: 360 aaggggacatt 350
>gnl|LJGI|GO025383 similar to UniRef100_Q3I4X9 Cluster: GAMYB-binding protein; n=1;
Glycine max|Rep: GAMYB-binding protein - Glycine max
(Soybean), partial (11%)
Length = 293
Score = 270 bits (136), Expect = 3e-71
Identities = 234/268 (87%), Gaps = 9/268 (3%)
Strand = Plus / Plus
Query: 963 gaaggagatgcttctgaaggagaaggaaaggaaggaacaggagctgagggctctggctca 1022
||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||| ||
Sbjct: 2 gaaggagatgcttttgaaggagaaggaaaggaaggagcaggagctgagggctttggcgca 61
Query: 1023 gaaagctcgttctgagagaactggtgtggcccctccggctgctgtttcttttcctcct-- 1080
|||||||||||||||||||||||| ||||||||||| |||| ||||||| | | ||
Sbjct: 62 gaaagctcgttctgagagaactggcgtggcccctccagctgttgtttctgctgtttctat 121
Query: 1081 -------gagaagagcagtgtggatgatgctgacatgagagttgattatgatcatccaag 1133
||||||||||||||||| |||||||| ||||||| ||||||||| ||||||||
Sbjct: 122 gagtatggagaagagcagtgtggaagatgctgatatgagaggtgattatgagcatccaag 181
Query: 1134 ggatagggagaagaatttcccgaaggagtcaagggaagagagggaggatcggctgcagcg 1193
||| ||||||| |||||| || |||||||| |||||||||||||||||||||||||||||
Sbjct: 182 ggaaagggagaggaattttccaaaggagtcgagggaagagagggaggatcggctgcagcg 241
Query: 1194 cgagaagattcgtgaggaacgacgcaag 1221
|| |||||||||||||| || ||||||
Sbjct: 242 tgaaaagattcgtgaggagcggcgcaag 269