Miyakogusa Predicted Gene
- Lj3g3v3666590.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3666590.1 Non Chatacterized Hit- tr|B9SV78|B9SV78_RICCO
Putative uncharacterized protein OS=Ricinus communis G,38.41,3e-18,
,CUFF.46173.1
(930 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59369 1802 0.0
gnl|LJGI|FS362183 755 0.0
gnl|LJGI|TC63249 similar to UniRef100_A2RS74 Cluster: Adrb3 prot... 115 5e-25
gnl|LJGI|BP050493 76 4e-13
gnl|LJGI|BW598161 54 2e-06
>gnl|LJGI|TC59369
Length = 1311
Score = 1802 bits (909), Expect = 0.0
Identities = 923/930 (99%)
Strand = Plus / Plus
Query: 1 atggtattcttgttacacaaatttgcaaaactggagaatcatcaccatcaccatgatcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 atggtattcttgttacacaaatttgcaaaactggagaatcatcaccatcaccatgatcct 226
Query: 61 cctcaatctgaggaattacaagcttccttgcaggctttccgatctgaagtttccaaattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 cctcaatctgaggaattacaagcttccttgcaggctttccgatctgaagtttccaaattc 286
Query: 121 attgatcaattagcattggatttgaaacccggatcagagatcttgtccttgtcatggatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 attgatcaattagcattggatttgaaacccggatcagagatcttgtccttgtcatggatt 346
Query: 181 gaaaaatgccttgagctcttatccatcaccatcaaggctcttgcaaaccttgctgtggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gaaaaatgccttgagctcttatccatcaccatcaaggctcttgcaaaccttgctgtggat 406
Query: 241 atagattacccaatgagtgtatgggaggttgattctattgaagggtatctcagctacagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 atagattacccaatgagtgtatgggaggttgattctattgaagggtatctcagctacagc 466
Query: 301 ttgtgtttactggatcttttcaattccatttcttcttcattttctcggctcgaacaggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ttgtgtttactggatcttttcaattccatttcttcttcattttctcggctcgaacaggct 526
Query: 361 cgcctctcgctttctcatggcttggccttattggagaagaattcaccatcttcagccaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 cgcctctcgctttctcatggcttggccttattggagaagaattcaccatcttcagccaca 586
Query: 421 gggcatcatctgaaagcaattcagccaggttgtttcagcaccaagtttggtgaagaattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gggcatcatctgaaagcaattcagccaggttgtttcagcaccaagtttggtgaagaattt 646
Query: 481 tacacagaaagtgataaagcaaggnnnnnnnctggtaaggaatgggttgttcatgaagct 540
|||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 647 tacacagaaagtgataaagcaaggtttttttctggtaaggaatgggttgttcatgaagct 706
Query: 541 gtgaaggaaataaagagtattgggttctgggtatgtggggtattgttgtctggtttgtgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 gtgaaggaaataaagagtattgggttctgggtatgtggggtattgttgtctggtttgtgt 766
Query: 601 actgatgctaagccatacatggagctgaagaaaatggcaggtgagtttgatggttcttca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 actgatgctaagccatacatggagctgaagaaaatggcaggtgagtttgatggttcttca 826
Query: 661 attctcacacttgattccaaaataagtgaaggggaagtgaagcaaaatccaatcttgaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 attctcacacttgattccaaaataagtgaaggggaagtgaagcaaaatccaatcttgaag 886
Query: 721 gaggtgaaagaggtaaatgatgctcttgctgaacttcttgttgcttcagatgaagtgaag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 gaggtgaaagaggtaaatgatgctcttgctgaacttcttgttgcttcagatgaagtgaag 946
Query: 781 catgaagcaaccaaggaattgcagacaaagctgcacgtgttcgagaagctatgtgatgtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947 catgaagcaaccaaggaattgcagacaaagctgcacgtgttcgagaagctatgtgatgtt 1006
Query: 841 gtaaaagcgaaggtggatgatgtattttccaaggtaatggcccagagaactgaattaatt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 gtaaaagcgaaggtggatgatgtattttccaaggtaatggcccagagaactgaattaatt 1066
Query: 901 gattgttttcaagtgaggaaacaaaactaa 930
||||||||||||||||||||||||||||||
Sbjct: 1067 gattgttttcaagtgaggaaacaaaactaa 1096
>gnl|LJGI|FS362183
Length = 698
Score = 755 bits (381), Expect = 0.0
Identities = 381/381 (100%)
Strand = Plus / Plus
Query: 1 atggtattcttgttacacaaatttgcaaaactggagaatcatcaccatcaccatgatcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 atggtattcttgttacacaaatttgcaaaactggagaatcatcaccatcaccatgatcct 377
Query: 61 cctcaatctgaggaattacaagcttccttgcaggctttccgatctgaagtttccaaattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cctcaatctgaggaattacaagcttccttgcaggctttccgatctgaagtttccaaattc 437
Query: 121 attgatcaattagcattggatttgaaacccggatcagagatcttgtccttgtcatggatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 attgatcaattagcattggatttgaaacccggatcagagatcttgtccttgtcatggatt 497
Query: 181 gaaaaatgccttgagctcttatccatcaccatcaaggctcttgcaaaccttgctgtggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gaaaaatgccttgagctcttatccatcaccatcaaggctcttgcaaaccttgctgtggat 557
Query: 241 atagattacccaatgagtgtatgggaggttgattctattgaagggtatctcagctacagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 atagattacccaatgagtgtatgggaggttgattctattgaagggtatctcagctacagc 617
Query: 301 ttgtgtttactggatcttttcaattccatttcttcttcattttctcggctcgaacaggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ttgtgtttactggatcttttcaattccatttcttcttcattttctcggctcgaacaggct 677
Query: 361 cgcctctcgctttctcatggc 381
|||||||||||||||||||||
Sbjct: 678 cgcctctcgctttctcatggc 698
>gnl|LJGI|TC63249 similar to UniRef100_A2RS74 Cluster: Adrb3 protein; n=2; Mus
musculus|Rep: Adrb3 protein - Mus musculus (Mouse),
partial (6%)
Length = 1413
Score = 115 bits (58), Expect = 5e-25
Identities = 115/134 (85%)
Strand = Plus / Plus
Query: 213 caaggctcttgcaaaccttgctgtggatatagattacccaatgagtgtatgggaggttga 272
||||||| ||||||| |||| ||||||||| ||||| || |||||| ||||||| |||
Sbjct: 367 caaggcttttgcaaagcttgttgtggatattgattatcctatgagtagatgggagaatga 426
Query: 273 ttctattgaagggtatctcagctacagcttgtgtttactggatcttttcaattccatttc 332
||| |||||||||||||||||||||| |||| |||| || | ||||| |||||||||||
Sbjct: 427 ttccattgaagggtatctcagctacaccttgagtttgcttcagcttttgaattccatttc 486
Query: 333 ttcttcattttctc 346
||||||| ||||||
Sbjct: 487 ttcttcaatttctc 500
Score = 93.7 bits (47), Expect = 2e-18
Identities = 146/179 (81%)
Strand = Plus / Plus
Query: 512 ctggtaaggaatgggttgttcatgaagctgtgaaggaaataaagagtattgggttctggg 571
|||| |||||| || |||||||||| | | | |||||||| |||||| |||| |||||||
Sbjct: 750 ctggcaaggaaaggattgttcatgagggtattaaggaaatgaagagtgttggattctggg 809
Query: 572 tatgtggggtattgttgtctggtttgtgtactgatgctaagccatacatggagctgaaga 631
|||||||||| | |||||| |||| | | |||||||| ||| ||||||||||||| ||
Sbjct: 810 tatgtggggttgtcttgtcttgtttatatggtgatgctaggccttacatggagctgagga 869
Query: 632 aaatggcaggtgagtttgatggttcttcaattctcacacttgattccaaaataagtgaa 690
|||| || |||| |||||| |||||||| || ||| ||||||| ||| || ||||||
Sbjct: 870 aaattgctggtgggtttgaaagttcttcagttgccacccttgatttcaagatcagtgaa 928
>gnl|LJGI|BP050493
Length = 525
Score = 75.8 bits (38), Expect = 4e-13
Identities = 38/38 (100%)
Strand = Plus / Minus
Query: 833 gtgatgttgtaaaagcgaaggtggatgatgtattttcc 870
||||||||||||||||||||||||||||||||||||||
Sbjct: 95 gtgatgttgtaaaagcgaaggtggatgatgtattttcc 58
>gnl|LJGI|BW598161
Length = 464
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 270 tgattctattgaagggtatctcagctacagcttgtgttt 308
|||||| |||||||||||||||||||||| |||| ||||
Sbjct: 406 tgattccattgaagggtatctcagctacaccttgagttt 444