Miyakogusa Predicted Gene
- Lj3g3v3666580.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3666580.1 tr|Q67BK3|Q67BK3_SOYBN AGL15 OS=Glycine max
GN=AGL15 PE=2 SV=1,76.99,1.99993e-41,MADS_BOX_1,Transcription factor,
MADS-box; no description,Transcription factor, MADS-box;
SRF-like,T,CUFF.46170.1
(345 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS335696 similar to UniRef100_Q67BK3 Cluster: AGL15; n=... 361 2e-99
gnl|LJGI|FS318714 similar to UniRef100_Q9SZJ6 Cluster: Agamous-l... 64 6e-10
gnl|LJGI|FS333501 similar to UniRef100_A7NUI9 Cluster: Chromosom... 64 6e-10
gnl|LJGI|DC595031 similar to UniRef100_A7NUI9 Cluster: Chromosom... 64 6e-10
gnl|LJGI|GO010718 similar to UniRef100_A9YWS1 Cluster: MADS-box ... 58 4e-08
gnl|LJGI|TC75219 similar to UniRef100_Q56NI4 Cluster: MADS box p... 58 4e-08
gnl|LJGI|GO024192 similar to UniRef100_Q8LLR1 Cluster: MADS-box ... 52 2e-06
>gnl|LJGI|FS335696 similar to UniRef100_Q67BK3 Cluster: AGL15; n=1; Glycine max|Rep:
AGL15 - Glycine max (Soybean), partial (66%)
Length = 772
Score = 361 bits (182), Expect = 2e-99
Identities = 182/182 (100%)
Strand = Plus / Plus
Query: 1 atgggtcggggtaagattgaaatcaagaaaatagagaatgctaatagcaggcaagtcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atgggtcggggtaagattgaaatcaagaaaatagagaatgctaatagcaggcaagtcaca 322
Query: 61 ttctccaagaggagaactgggttgctcaagaaggcaaaggagctagccattctctgtgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttctccaagaggagaactgggttgctcaagaaggcaaaggagctagccattctctgtgat 382
Query: 121 gctgaggttgctgttatcatcttctccaacacaggcaaaatgtttgagttttccagttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gctgaggttgctgttatcatcttctccaacacaggcaaaatgtttgagttttccagttct 442
Query: 181 gg 182
||
Sbjct: 443 gg 444
Score = 123 bits (62), Expect = 7e-28
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 276 gaaggaagattctaagatggtggatattcttaaagatgaaattgcaaagctagaaacaaa 335
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 444 gaaggaagattctaagatggtggatattcttcaagatgaaattgcaaagctagaaacgaa 503
Query: 336 gcaattacgg 345
||||||||||
Sbjct: 504 gcaattacgg 513
>gnl|LJGI|FS318714 similar to UniRef100_Q9SZJ6 Cluster: Agamous-like MADS-box protein
AGL21; n=2; Arabidopsis thaliana|Rep: Agamous-like
MADS-box protein AGL21 - Arabidopsis thaliana (Mouse-ear
cress), partial (47%)
Length = 859
Score = 63.9 bits (32), Expect = 6e-10
Identities = 92/112 (82%)
Strand = Plus / Plus
Query: 46 agcaggcaagtcacattctccaagaggagaactgggttgctcaagaaggcaaaggagcta 105
||||||||||| ||||| || ||| |||| | ||| ||||| |||||||| ||||||||
Sbjct: 111 agcaggcaagtgacattttcgaagcggaggaatggtttgctgaagaaggcgaaggagctt 170
Query: 106 gccattctctgtgatgctgaggttgctgttatcatcttctccaacacaggca 157
|| || | |||||||||||||||| ||| | |||||||||| ||| ||||
Sbjct: 171 gcgatcttgtgtgatgctgaggttggagttgtgatcttctccagcactggca 222
>gnl|LJGI|FS333501 similar to UniRef100_A7NUI9 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (67%)
Length = 550
Score = 63.9 bits (32), Expect = 6e-10
Identities = 92/112 (82%)
Strand = Plus / Plus
Query: 46 agcaggcaagtcacattctccaagaggagaactgggttgctcaagaaggcaaaggagcta 105
||||||||||| ||||| || ||| |||| | ||| ||||| |||||||| ||||||||
Sbjct: 88 agcaggcaagtgacattttcgaagcggaggaatggtttgctgaagaaggcgaaggagctt 147
Query: 106 gccattctctgtgatgctgaggttgctgttatcatcttctccaacacaggca 157
|| || | |||||||||||||||| ||| | |||||||||| ||| ||||
Sbjct: 148 gcgatcttgtgtgatgctgaggttggagttgtgatcttctccagcactggca 199
>gnl|LJGI|DC595031 similar to UniRef100_A7NUI9 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (80%)
Length = 580
Score = 63.9 bits (32), Expect = 6e-10
Identities = 92/112 (82%)
Strand = Plus / Plus
Query: 46 agcaggcaagtcacattctccaagaggagaactgggttgctcaagaaggcaaaggagcta 105
||||||||||| ||||| || ||| |||| | ||| ||||| |||||||| ||||||||
Sbjct: 65 agcaggcaagtgacattttcgaagcggaggaatggtttgctgaagaaggcgaaggagctt 124
Query: 106 gccattctctgtgatgctgaggttgctgttatcatcttctccaacacaggca 157
|| || | |||||||||||||||| ||| | |||||||||| ||| ||||
Sbjct: 125 gcgatcttgtgtgatgctgaggttggagttgtgatcttctccagcactggca 176
>gnl|LJGI|GO010718 similar to UniRef100_A9YWS1 Cluster: MADS-box protein; n=1;
Medicago truncatula|Rep: MADS-box protein - Medicago
truncatula (Barrel medic), partial (78%)
Length = 681
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 46 agcaggcaagtcacattctccaagaggagaactgggttgctcaagaaggcaaaggagcta 105
||||||||||| || ||||| |||||||||| || ||| ||||||| || || ||| ||
Sbjct: 119 agcaggcaagtgactttctcaaagaggagaaagggattgatcaagaaagccaaagagtta 178
Query: 106 gccattctctgtgatgc 122
||||| |||||||||||
Sbjct: 179 gccatcctctgtgatgc 195
>gnl|LJGI|TC75219 similar to UniRef100_Q56NI4 Cluster: MADS box protein M6; n=1;
Pisum sativum|Rep: MADS box protein M6 - Pisum sativum
(Garden pea), complete
Length = 1276
Score = 58.0 bits (29), Expect = 4e-08
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 48 caggcaagtcacattctccaagaggagaactgggttgctcaagaaggcaaaggagctagc 107
||||||||| ||||| | |||||||||| |||| | |||||||| || | ||||| |
Sbjct: 357 caggcaagttacatttgcaaagaggagaaatgggcttctcaagaaagcttatgagctttc 416
Query: 108 cattctctgtgatgctgaggttgctgttatcatcttctcca 148
||||||||||||||||||||||| |||| |||||||||
Sbjct: 417 tgttctctgtgatgctgaggttgctcttattgtcttctcca 457
>gnl|LJGI|GO024192 similar to UniRef100_Q8LLR1 Cluster: MADS-box protein 3; n=1; Vitis
vinifera|Rep: MADS-box protein 3 - Vitis vinifera
(Grape), partial (53%)
Length = 482
Score = 52.0 bits (26), Expect = 2e-06
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 61 ttctccaagaggagaactgggttgctcaagaaggcaaaggagctagccattctctgtgat 120
|||||||| ||||| | ||| ||||||||||| ||| ||||| | ||||| ||||||
Sbjct: 155 ttctccaaaaggaggaatggtttgctcaagaaagcatgtgagctctcaattctgtgtgat 214
Query: 121 gctgaggttgctgttatcatcttctc 146
|||||||||||| | ||||| |||||
Sbjct: 215 gctgaggttgctctcatcattttctc 240