Miyakogusa Predicted Gene
- Lj3g3v3640130.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3640130.1 Non Chatacterized Hit- tr|C5XYB0|C5XYB0_SORBI
Putative uncharacterized protein Sb04g027330
OS=Sorghu,50,2e-19,HEAT-SHOCK PROTEIN 22,NULL; SMALL HEAT-SHOCK
PROTEIN (HSP20) FAMILY,NULL; HSP20,Alpha crystallin/Hsp,CUFF.46161.1
(630 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71967 similar to UniRef100_P46254 Cluster: Heat shock... 1098 0.0
gnl|LJGI|BP069929 similar to UniRef100_P46254 Cluster: Heat shoc... 119 2e-26
>gnl|LJGI|TC71967 similar to UniRef100_P46254 Cluster: Heat shock 22 kDa protein,
mitochondrial precursor; n=1; Pisum sativum|Rep: Heat
shock 22 kDa protein, mitochondrial precursor - Pisum
sativum (Garden pea), partial (82%)
Length = 822
Score = 1098 bits (554), Expect = 0.0
Identities = 563/566 (99%)
Strand = Plus / Plus
Query: 65 tccgccccgctgctactgcttctgcttcccgctctttcaacaccaacgccatgcgccgct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 tccgccccgctgctactgcttctgcttcccgctctttcaacaccaacgccatgcgccgct 193
Query: 125 acgacgaggcttccgatgaaagcgacgtcgacgtcgaccgccgctctgaccgtcgcgctg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 acgacgaggcttccgatgaaagcgacgtcgacgtcgaccgccgctctgaccgtcgcgctg 253
Query: 185 cacgccgcgatgatttcttctcagatgtgtatgatccattttctccaactaggagcttgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 cacgccgcgatgatttcttctcagatgtgtatgatccattttctccaactaggagcttgt 313
Query: 245 tccaggttctgaacacggtggatcagctcatgaacagccccttcatcactcctccaacca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tccaggttctgaacacggtggatcagctcatgaacagccccttcatcactcctccaacca 373
Query: 305 ggagtctgagccaggttttgaacacggtggatcagctcaagaacaaccctcgtggagctc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ggagtctgagccaggttttgaacacggtggatcagctcaagaacaaccctcgtggagctc 433
Query: 365 gaaacggctgggatgcgcgagagacagaggatgctctgcttctgcgtgtgaacatgcctg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gaaacggctgggatgcgcgagagacagaggatgctctgcttctgcgtgtgaacatgcctg 493
Query: 425 ggctgggaaaagaggatgtgaagattgctgtggagcagaacacgctgaccatcaggggtg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ggctgggaaaagaggatgtgaagattgctgtggagcagaacacgctgaccatcaggggtg 553
Query: 485 aaggtccaaaggaaagtgaggaggaggttggtggtggtcttcgctacaccagcaggattg 544
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 aaggtcccaaggaaagtgaggaggaggttggtggtggtcttcgctacaccagcaggattg 613
Query: 545 acttgccggacaagctttacaagattgatcagatcaaagctgagatgaagaatggtgtgc 604
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 614 acttgccggaccagctttaccagattgatcagatcaaagctgagatgaagaatggtgtgc 673
Query: 605 tcaaggtcactgtgcctaagatgaag 630
||||||||||||||||||||||||||
Sbjct: 674 tcaaggtcactgtgcctaagatgaag 699
>gnl|LJGI|BP069929 similar to UniRef100_P46254 Cluster: Heat shock 22 kDa protein,
mitochondrial precursor; n=1; Pisum sativum|Rep: Heat
shock 22 kDa protein, mitochondrial precursor - Pisum
sativum (Garden pea), partial (17%)
Length = 421
Score = 119 bits (60), Expect = 2e-26
Identities = 63/64 (98%)
Strand = Plus / Minus
Query: 567 gattgatcagatcaaagctgagatgaagaatggtgtgctcaaggtcactgtgcctaagat 626
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gattgatcagatccaagctgagatgaagaatggtgtgctcaaggtcactgtgcctaagat 362
Query: 627 gaag 630
||||
Sbjct: 361 gaag 358