Miyakogusa Predicted Gene
- Lj3g3v3639940.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3639940.1 tr|B9HTY4|B9HTY4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_659779 PE=3
SV=1,61.9,0,Serine/Threonine protein kinases,
catalytic,Serine/threonine- / dual-specificity protein kinase,
cat,CUFF.46122.1
(2121 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67418 similar to UniRef100_A7Q421 Cluster: Chromosome... 1522 0.0
gnl|LJGI|AV418711 homologue to UniRef100_A7NZ90 Cluster: Chromos... 98 3e-19
>gnl|LJGI|TC67418 similar to UniRef100_A7Q421 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 890
Score = 1522 bits (768), Expect = 0.0
Identities = 771/772 (99%)
Strand = Plus / Plus
Query: 1350 ggaccatcttttcggatctaatgcagatgcaacctgcttaagttggaagcaaaggcttga 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ggaccatcttttcggatctaatgcagatgcaacctgcttaagttggaagcaaaggcttga 61
Query: 1410 gatttgcataggagcagctaaaggattacattatcttcacacaggctctaacaaggcgat 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gatttgcataggagcagctaaaggattacattatcttcacacaggctctaacaaggcgat 121
Query: 1470 tattcaccgcgatgtcaaatctgcaaatatcctgctagatgaaaacctcatggctaaagt 1529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tattcaccgcgatgtcaaatctgcaaatatcctgctagatgaaaacctcatggctaaagt 181
Query: 1530 tgctgattttggtctttcaaagactggtccagacattgataagagatatgtcagcacagc 1589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tgctgattttggtctttcaaagactggtccagacattgataagagatatgtcagcacagc 241
Query: 1590 agtgaaaggaagttttggctatcttgatccagaatacttgatcacacagcagctgacaga 1649
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agtgaagggaagttttggctatcttgatccagaatacttgatcacacagcagctgacaga 301
Query: 1650 aaagtcagatgtttactcatttggggtggtcatgtttgaagtcctttgtgggagaccagt 1709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aaagtcagatgtttactcatttggggtggtcatgtttgaagtcctttgtgggagaccagt 361
Query: 1710 gattgatccatcacttccaagggaaaagatgaacctggtggagtggataatgagatggca 1769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gattgatccatcacttccaagggaaaagatgaacctggtggagtggataatgagatggca 421
Query: 1770 ggagagaagcaccattgaggaacttgttgatcatcaccttccaggttctggtcagataaa 1829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ggagagaagcaccattgaggaacttgttgatcatcaccttccaggttctggtcagataaa 481
Query: 1830 gtcagagtcactccatgaatttgttgacactgccaaaaagtgcttggcagaacatggaat 1889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gtcagagtcactccatgaatttgttgacactgccaaaaagtgcttggcagaacatggaat 541
Query: 1890 caacaggcctagcatgggagatgtattgtggcacttggaatatgctttgaggctggaagg 1949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 caacaggcctagcatgggagatgtattgtggcacttggaatatgctttgaggctggaagg 601
Query: 1950 tgttgatgagagatccaaccatggtggtgatgtttcctcccaaattcatcgctcagacac 2009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tgttgatgagagatccaaccatggtggtgatgtttcctcccaaattcatcgctcagacac 661
Query: 2010 tggattatctgccatggaatacagcatgggaagtgttggtgacatgtctaatgtttcaat 2069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tggattatctgccatggaatacagcatgggaagtgttggtgacatgtctaatgtttcaat 721
Query: 2070 gagcaaggtctttgcccagatggtgaaggaggataggcaactacttccttga 2121
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gagcaaggtctttgcccagatggtgaaggaggataggcaactacttccttga 773
>gnl|LJGI|AV418711 homologue to UniRef100_A7NZ90 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (37%)
Length = 419
Score = 97.6 bits (49), Expect = 3e-19
Identities = 283/361 (78%)
Strand = Plus / Plus
Query: 1385 gcttaagttggaagcaaaggcttgagatttgcataggagcagctaaaggattacattatc 1444
|||||||||||||| | || ||||| || ||||| ||| | |||| |||| | ||||| |
Sbjct: 40 gcttaagttggaaggagagacttgacatatgcattggatctgctagaggacttcattacc 99
Query: 1445 ttcacacaggctctaacaaggcgattattcaccgcgatgtcaaatctgcaaatatcctgc 1504
| ||||| |||| | || ||| |||||||||| || || || |||||||||||||| |
Sbjct: 100 tacacactggctatgctaaagcggttattcaccgtgacgtgaagtctgcaaatatcctac 159
Query: 1505 tagatgaaaacctcatggctaaagttgctgattttggtctttcaaagactggtccagaca 1564
| ||||| ||||| ||||| || |||||||||||||| | || ||||| || || ||
Sbjct: 160 ttgatgataacctaatggccaaggttgctgattttggattatcgaagaccggacctgaac 219
Query: 1565 ttgataagagatatgtcagcacagcagtgaaaggaagttttggctatcttgatccagaat 1624
| ||| ||| | |||| |||||||| |||||||| ||||| || || ||||||||||| |
Sbjct: 220 tcgatcagacacatgtgagcacagctgtgaaagggagtttcgggtaccttgatccagagt 279
Query: 1625 acttgatcacacagcagctgacagaaaagtcagatgtttactcatttggggtggtcatgt 1684
| || | | || || || |||||||||||||| || || || || ||||| || |||
Sbjct: 280 atttcaggaggcaacaactaacagaaaagtcagacgtgtattcgttcggggtcgttctgt 339
Query: 1685 ttgaagtcctttgtgggagaccagtgattgatccatcacttccaagggaaaagatgaacc 1744
||||||| ||||||| ||||| || || ||||| || ||||| ||||||| | ||||||
Sbjct: 340 ttgaagttctttgtgcaagacctgtcatagatccttcccttcctagggaaatggtgaacc 399
Query: 1745 t 1745
|
Sbjct: 400 t 400