Miyakogusa Predicted Gene
- Lj3g3v3639610.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3639610.2 Non Chatacterized Hit- tr|I1JAM1|I1JAM1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18283
PE,90.62,0,Cellulose_synt,Cellulose synthase; coiled-coil,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.46101.2
(3453 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62973 homologue to UniRef100_Q8GUZ9 Cluster: Cellulos... 2305 0.0
gnl|LJGI|FS319898 similar to UniRef100_A7PBB7 Cluster: Chromosom... 1221 0.0
gnl|LJGI|GO007099 homologue to UniRef100_A7PBB7 Cluster: Chromos... 591 e-167
gnl|LJGI|DC598741 homologue to UniRef100_A7PBB7 Cluster: Chromos... 276 9e-73
gnl|LJGI|TC80083 96 2e-18
gnl|LJGI|TC79309 similar to UniRef100_A9TSY5 Cluster: Cellulose ... 82 3e-14
gnl|LJGI|TC77626 similar to UniRef100_Q8GUZ9 Cluster: Cellulose ... 80 1e-13
gnl|LJGI|TC67739 similar to UniRef100_A7Q0I5 Cluster: Chromosome... 72 3e-11
gnl|LJGI|TC79938 similar to UniRef100_A7Q795 Cluster: Chromosome... 62 2e-08
>gnl|LJGI|TC62973 homologue to UniRef100_Q8GUZ9 Cluster: Cellulose synthase-like
protein D4; n=2; Populus tremuloides|Rep: Cellulose
synthase-like protein D4 - Populus tremuloides (Quaking
aspen), partial (35%)
Length = 1632
Score = 2305 bits (1163), Expect = 0.0
Identities = 1169/1171 (99%)
Strand = Plus / Plus
Query: 2283 ggatgaagaaatgaacctgtcaacgttccctaagaagtttgggaactcaactttcctcat 2342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggatgaagaaatgaacctgtcaacgttccctaagaagtttgggaactcaactttcctcat 60
Query: 2343 tgaatcaatcccagtggcagagttccaaggcaggccactcgctgatcaccctgctgtgaa 2402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaatcaatcccagtggcagagttccaaggcaggccactcgctgatcaccctgctgtgaa 120
Query: 2403 aaatgggcgccctcccggtgctctcaccataccccgcgagcttcttgatgcagcaaccgt 2462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaatgggcgccctcccggtgctctcaccataccccgcgagcttcttgatgcagcaaccgt 180
Query: 2463 ggcagaggccatcagtgtgatctcatgttggtatgaggacaagactgagtgggggcagcg 2522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcagaggccatcagtgtgatctcatgttggtatgaggacaagactgagtgggggcagcg 240
Query: 2523 cgtcggatggatctacggatcagtcactgaggatgttgtcaccggttatagaatgcacaa 2582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgtcggatggatctacggatcagtcactgaggatgttgtcaccggttatagaatgcacaa 300
Query: 2583 ccgaggatggaaatcagtttactgtgtgacaaagcgtgatgcttttcgcggtactgctcc 2642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccgaggatggaaatcagtttactgtgtgacaaagcgtgatgcttttcgcggtactgctcc 360
Query: 2643 catcaacctcactgataggctgcatcaagttcttaggtgggctacaggttcagttgagat 2702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 catcaacctcactgataggctgcatcaagttcttaggtgggctacaggttcagttgagat 420
Query: 2703 attcttctccagaaacaatgcatttcttgcaagccccagaatgaaaatccttcaaagaat 2762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 attcttctccagaaacaatgcatttcttgcaagccccagaatgaaaatccttcaaagaat 480
Query: 2763 agcataccttaatgttggaatctatccattcacttcttttttcctcattgtctactgctt 2822
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 481 agcatgccttaatgttggaatctatccattcacttcttttttcctcattgtctactactt 540
Query: 2823 cctccctgcactttccctcttctcaggccagttcattgttcaaacactcagcgtcacttt 2882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cctccctgcactttccctcttctcaggccagttcattgttcaaacactcagcgtcacttt 600
Query: 2883 tctctcttatctattaggcatcacagtgacactgtgcatacttgctgtgcttgagattaa 2942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tctctcttatctattaggcatcacagtgacactgtgcatacttgctgtgcttgagattaa 660
Query: 2943 atggtcagggattcagcttgaagaatggtggaggaatgagcagttttggttgattggagg 3002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atggtcagggattcagcttgaagaatggtggaggaatgagcagttttggttgattggagg 720
Query: 3003 gaccagtgctcatttagctgctgtgcttcaaggactgctcaaagtgatagcaggcattga 3062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gaccagtgctcatttagctgctgtgcttcaaggactgctcaaagtgatagcaggcattga 780
Query: 3063 aatctccttcaccttgacctcaaaatctggtggtgatgatgtcgatgacgagtttgctga 3122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aatctccttcaccttgacctcaaaatctggtggtgatgatgtcgatgacgagtttgctga 840
Query: 3123 tctctatgttttcaagtggacatcgctcatgataccacccatcacaatcatgatggttaa 3182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tctctatgttttcaagtggacatcgctcatgataccacccatcacaatcatgatggttaa 900
Query: 3183 cttgatagcaattgcagtcggagtgagcaggaccatatacagcaccatacctcagtggag 3242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 cttgatagcaattgcagtcggagtgagcaggaccatatacagcaccatacctcagtggag 960
Query: 3243 ccgtttgctaggtggtgttttcttcagcttttgggtgctgactcatctctacccttttgc 3302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ccgtttgctaggtggtgttttcttcagcttttgggtgctgactcatctctacccttttgc 1020
Query: 3303 taaaggtttgatgggaagaagagggaggacacctaccattgtttatgtgtggtcaggtct 3362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 taaaggtttgatgggaagaagagggaggacacctaccattgtttatgtgtggtcaggtct 1080
Query: 3363 catagcaatcacaatatcactcctttgggttgcaatcaatccccctcaaggtgccaacga 3422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 catagcaatcacaatatcactcctttgggttgcaatcaatccccctcaaggtgccaacga 1140
Query: 3423 gataggtggttcattccagttcccatgatag 3453
|||||||||||||||||||||||||||||||
Sbjct: 1141 gataggtggttcattccagttcccatgatag 1171
>gnl|LJGI|FS319898 similar to UniRef100_A7PBB7 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 682
Score = 1221 bits (616), Expect = 0.0
Identities = 619/620 (99%)
Strand = Plus / Plus
Query: 1 atggcatcaaaaccattcaaacaaagccggtcatctctttcagcagcttctgatgcatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atggcatcaaaaccattcaaacaaagccggtcatctctttcagcagcttctgatgcatct 122
Query: 61 gaagcccagaagcctcctttacctccaactgtaacatttgcccgaagaacttcctcgggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gaagcccagaagcctcctttacctccaactgtaacatttgcccgaagaacttcctcgggg 182
Query: 121 cgctacgtcaattactccagggatgatcttgacagtgagctgggaagtgagctaggaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 cgctacgtcaattactccagggatgatcttgacagtgagctgggaagtgagctaggaagt 242
Query: 181 actgatttcatgaattacacagtgcatttaccaccaacccctgataaccaacctatggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 actgatttcatgaattacacagtgcatttaccaccaacccctgataaccaacctatggat 302
Query: 241 ttaacagtctcacagaaagttgaggagcaatatgtatcaaactcgctatttaccggagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ttaacagtctcacagaaagttgaggagcaatatgtatcaaactcgctatttaccggagga 362
Query: 301 ttcaacagcatgactagagcccatctaatggataaggtgacagaatctaaagcaaaccat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ttcaacagcatgactagagcccatctaatggataaggtgacagaatctaaagcaaaccat 422
Query: 361 ccacagatggctggtgtaaaagggtcttcatgtgcagttcctggttgtgattgtaaagtg 420
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 423 ccacagatggctggtgtaaaagggtcttcatttgcagttcctggttgtgattgtaaagtg 482
Query: 421 atgagcgatgaacgcggtgaggatattcttccttgtgagtgtgattttaagatatgtaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 atgagcgatgaacgcggtgaggatattcttccttgtgagtgtgattttaagatatgtaga 542
Query: 481 gactgctatatagatgcagtgaaaacaggagatggaatgtgcctaggatgcaaagagcca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gactgctatatagatgcagtgaaaacaggagatggaatgtgcctaggatgcaaagagcca 602
Query: 541 tataagaacacagagctagatgaagtggctgtggataatggaaggtcatttccacttctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tataagaacacagagctagatgaagtggctgtggataatggaaggtcatttccacttctt 662
Query: 601 ccgccaaatgggggagtgtc 620
||||||||||||||||||||
Sbjct: 663 ccgccaaatgggggagtgtc 682
>gnl|LJGI|GO007099 homologue to UniRef100_A7PBB7 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 729
Score = 591 bits (298), Expect = e-167
Identities = 614/718 (85%), Gaps = 1/718 (0%)
Strand = Plus / Plus
Query: 2590 tggaaatcagtttactgtgtgacaaagcgtgatgcttttcgcggtactgctcccatcaac 2649
||||||||||||||||| ||||||||||| ||||| || ||||| ||||||||||| ||
Sbjct: 13 tggaaatcagtttactgcgtgacaaagcgcgatgccttccgcggaactgctcccattaat 72
Query: 2650 ctcactgataggctgcatcaagttcttaggtgggctacaggttcagttgagatattcttc 2709
||||| || |||| ||||| || ||||| |||||||| || || ||||| |||||||||
Sbjct: 73 ctcaccgaccggctccatcaggtccttagatgggctaccggctcggttgaaatattcttc 132
Query: 2710 tccagaaacaatgcatttcttgcaagccccagaatgaaaatccttcaaagaatagcatac 2769
|| ||||||||||| |||| || ||||| ||||||||| | ||||||||||| ||||||
Sbjct: 133 tcaagaaacaatgcccttctggctagcccaagaatgaaacttcttcaaagaattgcatac 192
Query: 2770 cttaatgttggaatctatccattcacttcttttttcctcattgtctactgcttcctccct 2829
||||||||||| || || || || || || | ||||| |||||||||||||| ||||||
Sbjct: 193 cttaatgttgggatttacccttttacatccatattcctaattgtctactgctttctccct 252
Query: 2830 gcactttccctcttctcaggccagttcattgttcaaacactcagcgtcacttttctctct 2889
|| || ||||||||||| |||||||||||||| ||||| |||| |||||| || || |||
Sbjct: 253 gccctatccctcttctctggccagttcattgtccaaaccctcaacgtcacattcctttct 312
Query: 2890 tatctattaggcatcacagtgacactgtgcatacttgctgtgcttgagattaaatggtca 2949
||||| || |||||||| |||| |||||||||||||| ||||| || || || ||||||
Sbjct: 313 tatctgttgggcatcactttgactctgtgcatacttgcagtgctcgaaatcaagtggtca 372
Query: 2950 gggattcagcttgaagaatggtggaggaatgagcagttttggttgattggagggaccagt 3009
|| ||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 373 ggcattgcgcttgaagaatggtggagaaatgagcagttttggttgattggaggaaccagt 432
Query: 3010 gctcatttagctgctgtgcttcaaggactgctcaaagtgatagcaggcattgaaatctcc 3069
|| ||| |||| |||||| ||||||| |||||||||| |||||||| |||||||||||
Sbjct: 433 gcccatctagcagctgtgattcaaggtttgctcaaagtcatagcagggattgaaatctca 492
Query: 3070 ttcaccttgacctcaaaatctggtggtgatgatgtcgatgacgagtttgctgatctctat 3129
||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 493 ttcaccttgacttcaaaatctggtggtgatgatgtagacgacgagtttgctgatctctat 552
Query: 3130 gttttcaagtggacatcgctcatgataccacccatcacaatcatgatggttaacttgata 3189
|| | || ||| |||| |||||||||||||| ||||| || |||||||||||||||||
Sbjct: 553 attgtgaaatggtcatccctcatgataccaccaatcacgataatgatggttaacttgatc 612
Query: 3190 gcaattgcagtcggagtgagcaggaccatatacagcaccatacctcagtggagccgtttg 3249
|| || |||||||| || || |||||||||||| ||||| |||||||| ||| ||
Sbjct: 613 gcgatcgcagtcggcgttag-tcgaccatatacagtgtgataccacagtggagtcgtctg 671
Query: 3250 ctaggtggtgttttcttcagcttttgggtgctgactcatctctacccttttgctaaag 3307
|||||||||||||||| || ||||||||| || ||||||||||||||||||| ||||
Sbjct: 672 ataggtggtgttttctttagtttttgggtgttggctcatctctacccttttgcaaaag 729
>gnl|LJGI|DC598741 homologue to UniRef100_A7PBB7 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 139
Score = 276 bits (139), Expect = 9e-73
Identities = 139/139 (100%)
Strand = Plus / Plus
Query: 2010 gaggtttgaagggattgatccctctgatagatatgctaatcacaacactgtcttctttga 2069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggtttgaagggattgatccctctgatagatatgctaatcacaacactgtcttctttga 60
Query: 2070 tgtaaacatgagagcccttgatggtcttcaagggccagtgtatgtaggaactggttgtct 2129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtaaacatgagagcccttgatggtcttcaagggccagtgtatgtaggaactggttgtct 120
Query: 2130 tttcagaagggttgccctt 2148
|||||||||||||||||||
Sbjct: 121 tttcagaagggttgccctt 139
>gnl|LJGI|TC80083
Length = 1107
Score = 95.6 bits (48), Expect = 2e-18
Identities = 112/132 (84%), Gaps = 1/132 (0%)
Strand = Plus / Plus
Query: 2930 tgcttgagattaaatggtcagggattcagcttgaagaatggtggaggaatga-gcagttt 2988
||||||||||||| ||||||| |||||||| ||||||||| ||| ||||| |||||||
Sbjct: 844 tgcttgagattaagtggtcagcaattcagctggaagaatggcggataaatgaagcagttt 903
Query: 2989 tggttgattggagggaccagtgctcatttagctgctgtgcttcaaggactgctcaaagtg 3048
||||| ||||||||||||| ||| || |||||| ||||| |||| ||||| |||||
Sbjct: 904 tggtttattggagggaccaatgcccacttagctattgtgccccaagtcctgctgaaagtc 963
Query: 3049 atagcaggcatt 3060
||||||||||||
Sbjct: 964 atagcaggcatt 975
>gnl|LJGI|TC79309 similar to UniRef100_A9TSY5 Cluster: Cellulose synthase-like D6,
glycosyltransferase family 2 protein; n=2; Physcomitrella
patens|Rep: Cellulose synthase-like D6,
glycosyltransferase family 2 protein - Physcomitrella
patens subsp. patens, partial (19%)
Length = 719
Score = 81.8 bits (41), Expect = 3e-14
Identities = 140/173 (80%)
Strand = Plus / Plus
Query: 2554 gatgttgtcaccggttatagaatgcacaaccgaggatggaaatcagtttactgtgtgaca 2613
||||| ||||| ||||| ||||||||||| |||| |||| ||| || |||||||| ||
Sbjct: 323 gatgtggtcactggttacagaatgcacaatagagggtggagatctgtgtactgtgtcacc 382
Query: 2614 aagcgtgatgcttttcgcggtactgctcccatcaacctcactgataggctgcatcaagtt 2673
|| | ||||| ||| | || || |||||||||||| | || |||||||| ||||| |||
Sbjct: 383 aaaagagatgcatttagaggaacagctcccatcaacttaacagataggctccatcaggtt 442
Query: 2674 cttaggtgggctacaggttcagttgagatattcttctccagaaacaatgcatt 2726
|| | ||||| |||||||| || ||||| |||||||| || |||||||||||
Sbjct: 443 ctccgatgggcaacaggttctgtagagatcttcttctctaggaacaatgcatt 495
>gnl|LJGI|TC77626 similar to UniRef100_Q8GUZ9 Cluster: Cellulose synthase-like protein
D4; n=2; Populus tremuloides|Rep: Cellulose synthase-like
protein D4 - Populus tremuloides (Quaking aspen), partial
(10%)
Length = 576
Score = 79.8 bits (40), Expect = 1e-13
Identities = 115/140 (82%)
Strand = Plus / Plus
Query: 3256 ggtgttttcttcagcttttgggtgctgactcatctctacccttttgctaaaggtttgatg 3315
||||| ||||||||||||||||||||| |||||| || || ||||| || || | |||
Sbjct: 158 ggtgtgttcttcagcttttgggtgctggttcatctttatccatttgcaaaggggcttatg 217
Query: 3316 ggaagaagagggaggacacctaccattgtttatgtgtggtcaggtctcatagcaatcaca 3375
||||||||||| | |||||| || ||||| | ||| ||||| ||||| ||| | |||||
Sbjct: 218 ggaagaagaggtaagacaccaacgattgtgtttgtttggtctggtcttatatccatcact 277
Query: 3376 atatcactcctttgggttgc 3395
|||||||| || ||||||||
Sbjct: 278 atatcactgctctgggttgc 297
>gnl|LJGI|TC67739 similar to UniRef100_A7Q0I5 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 1028
Score = 71.9 bits (36), Expect = 3e-11
Identities = 102/124 (82%)
Strand = Plus / Plus
Query: 2968 tggtggaggaatgagcagttttggttgattggagggaccagtgctcatttagctgctgtg 3027
|||||||| |||||||| || ||||||||||| || || ||||| || ||||||||
Sbjct: 341 tggtggagaaatgagcaattctggttgattggtggaacaagtgcccaccctgctgctgtt 400
Query: 3028 cttcaaggactgctcaaagtgatagcaggcattgaaatctccttcaccttgacctcaaaa 3087
| ||||||||| | || ||||||||||| | || |||||||||||| |||||||||||
Sbjct: 401 ttacaaggactgttgaaggtgatagcaggagtagacatctccttcaccctgacctcaaaa 460
Query: 3088 tctg 3091
||||
Sbjct: 461 tctg 464
Score = 65.9 bits (33), Expect = 2e-09
Identities = 75/89 (84%)
Strand = Plus / Plus
Query: 2638 gctcccatcaacctcactgataggctgcatcaagttcttaggtgggctacaggttcagtt 2697
|||||||||||| | || |||||||| ||||| ||||| | ||||| |||||||| ||
Sbjct: 11 gctcccatcaacttaacagataggctccatcaggttctccgatgggcaacaggttctgta 70
Query: 2698 gagatattcttctccagaaacaatgcatt 2726
||||| |||||||| || |||||||||||
Sbjct: 71 gagatcttcttctctaggaacaatgcatt 99
>gnl|LJGI|TC79938 similar to UniRef100_A7Q795 Cluster: Chromosome chr18 scaffold_59,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_59, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 1021
Score = 61.9 bits (31), Expect = 2e-08
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 2968 tggtggaggaatgagcagttttggttgattggagg 3002
|||||||||||||||||||||||| ||||||||||
Sbjct: 820 tggtggaggaatgagcagttttgggtgattggagg 854