Miyakogusa Predicted Gene
- Lj3g3v3639570.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3639570.1 Non Chatacterized Hit- tr|Q25BL9|Q25BL9_BRAOL
Heat shock factor, putative OS=Brassica oleracea
GN=23,36.36,4e-18,HEAT STRESS TRANSCRIPTION FACTOR,NULL; HEAT SHOCK
TRANSCRIPTION FACTOR,NULL; seg,NULL,CUFF.46076.1
(1049 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60670 similar to UniRef100_A7PBA1 Cluster: Chromosome... 1072 0.0
gnl|LJGI|TC64067 similar to UniRef100_A7PC49 Cluster: Chromosome... 392 e-108
gnl|LJGI|TC57166 287 7e-77
>gnl|LJGI|TC60670 similar to UniRef100_A7PBA1 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 891
Score = 1072 bits (541), Expect = 0.0
Identities = 548/549 (99%), Gaps = 1/549 (0%)
Strand = Plus / Plus
Query: 501 ttctgggcagccatgtgtggcagtagaatctcaatttcctgttagttgtatgaccaatag 560
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4 ttctgggcagccatgtgtggcagtagaatctcaatttc-tgttagttgtatgaccaatag 62
Query: 561 catgtctgaggtgcaacctccacctgctgtgttgacggattgtgttagcacagctgaatt 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 catgtctgaggtgcaacctccacctgctgtgttgacggattgtgttagcacagctgaatt 122
Query: 621 tccagaattaatggcacgaagttgccaagatagtgttttggattttggtaaagttcaagg 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tccagaattaatggcacgaagttgccaagatagtgttttggattttggtaaagttcaagg 182
Query: 681 atcggggacagaaagcggctccatgaatcctgccctaagttttgcaggctctaacatcgg 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 atcggggacagaaagcggctccatgaatcctgccctaagttttgcaggctctaacatcgg 242
Query: 741 gagtgagccggagatagaggcaatgtcgactgttttagatgggacacagtctcttgaagc 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gagtgagccggagatagaggcaatgtcgactgttttagatgggacacagtctcttgaagc 302
Query: 801 taatgcattttctcctgatgcagatgtaatttctaagcttccaggaatcaatgatgaatt 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 taatgcattttctcctgatgcagatgtaatttctaagcttccaggaatcaatgatgaatt 362
Query: 861 ctgggaacaattttttagcccaagcccacttactggagatacagatgaagttgaatccag 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ctgggaacaattttttagcccaagcccacttactggagatacagatgaagttgaatccag 422
Query: 921 ttctctgggatatgggttgactgaagaccaggaatatgaaaaggagattcaacaggaaaa 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ttctctgggatatgggttgactgaagaccaggaatatgaaaaggagattcaacaggaaaa 482
Query: 981 gatggataagaaacagtatattgaccatctttcacatcagatggaacttcttgcatcgga 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gatggataagaaacagtatattgaccatctttcacatcagatggaacttcttgcatcgga 542
Query: 1041 gtcttaatt 1049
|||||||||
Sbjct: 543 gtcttaatt 551
>gnl|LJGI|TC64067 similar to UniRef100_A7PC49 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 735
Score = 392 bits (198), Expect = e-108
Identities = 198/198 (100%)
Strand = Plus / Plus
Query: 1 atgcaagaacttgtgaggttaagacaacagcaacaatcgactgataaccaattgcaaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 atgcaagaacttgtgaggttaagacaacagcaacaatcgactgataaccaattgcaaggt 597
Query: 61 gttgggcaacgtgtgcaggtaatggagcagcgtcagcaccagatgatgtcatttctggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gttgggcaacgtgtgcaggtaatggagcagcgtcagcaccagatgatgtcatttctggct 657
Query: 121 aaggccatgcatagtccgggaatattggctcagtttgtacagcagcagaatgaaagtaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 aaggccatgcatagtccgggaatattggctcagtttgtacagcagcagaatgaaagtaat 717
Query: 181 agacacatttctggagtt 198
||||||||||||||||||
Sbjct: 718 agacacatttctggagtt 735
>gnl|LJGI|TC57166
Length = 928
Score = 287 bits (145), Expect = 7e-77
Identities = 152/153 (99%), Gaps = 1/153 (0%)
Strand = Plus / Plus
Query: 897 agatacagatgaagttgaatccagttctctgggatatgggttgactgaagaccaggaata 956
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 agatacagatgaagttgaatccagt-ctctgggatatgggttgactgaagaccaggaata 59
Query: 957 tgaaaaggagattcaacaggaaaagatggataagaaacagtatattgaccatctttcaca 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 tgaaaaggagattcaacaggaaaagatggataagaaacagtatattgaccatctttcaca 119
Query: 1017 tcagatggaacttcttgcatcggagtcttaatt 1049
|||||||||||||||||||||||||||||||||
Sbjct: 120 tcagatggaacttcttgcatcggagtcttaatt 152