Miyakogusa Predicted Gene
- Lj3g3v3639450.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3639450.1 tr|A9TS65|A9TS65_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,71.43,1e-18,seg,NULL,CUFF.46066.1
(804 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57897 similar to UniRef100_A7QW11 Cluster: Chromosome... 1594 0.0
gnl|LJGI|TC76755 157 1e-37
>gnl|LJGI|TC57897 similar to UniRef100_A7QW11 Cluster: Chromosome undetermined
scaffold_197, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_197,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (67%)
Length = 1136
Score = 1594 bits (804), Expect = 0.0
Identities = 804/804 (100%)
Strand = Plus / Plus
Query: 1 atgaactctctcgttgtaagctcacacacttcttcattccgcaccttcccacactcttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 atgaactctctcgttgtaagctcacacacttcttcattccgcaccttcccacactcttcc 202
Query: 61 tcaacacaaagtttcaatcttttccccaatctaagacaacccactttcctcaattttcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tcaacacaaagtttcaatcttttccccaatctaagacaacccactttcctcaattttcat 262
Query: 121 ttcttctcctctaaattcaagccaccccacttcatcgcatgttgctcatctgggtcatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttcttctcctctaaattcaagccaccccacttcatcgcatgttgctcatctgggtcatca 322
Query: 181 ccaaatcgatcgaacccttcagaggaatcgattcttcaaaatgacatctttcatgctgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ccaaatcgatcgaacccttcagaggaatcgattcttcaaaatgacatctttcatgctgaa 382
Query: 241 gtcacaacccccaatgttccttcatttgcttctcctgtgtccaagtttagcttcactgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gtcacaacccccaatgttccttcatttgcttctcctgtgtccaagtttagcttcactgac 442
Query: 301 caagctttctttctcatcactttcattgcctgcacgacttcagtgacattcactagcctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 caagctttctttctcatcactttcattgcctgcacgacttcagtgacattcactagcctt 502
Query: 361 gtttttgctgctgttcccactctatttgcaatgagaaatgctgcaatatccctttcaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gtttttgctgctgttcccactctatttgcaatgagaaatgctgcaatatccctttcaaag 562
Query: 421 ttagcagatacagctcgtgaggaactccccagcaccatggctgctattaggctttcaggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ttagcagatacagctcgtgaggaactccccagcaccatggctgctattaggctttcaggg 622
Query: 481 atggaaataagtgatctcacactagaattaagtgatctaagccaggaaatagcagatgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atggaaataagtgatctcacactagaattaagtgatctaagccaggaaatagcagatgga 682
Query: 541 gtcaacaagtcagcccaagctttgcaagctgcagaagctggaatcaaacagattggttca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gtcaacaagtcagcccaagctttgcaagctgcagaagctggaatcaaacagattggttca 742
Query: 601 atggcacaagaacaaactatgtctatgattgaagagagggcaaatttgcctataatatct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 atggcacaagaacaaactatgtctatgattgaagagagggcaaatttgcctataatatct 802
Query: 661 ttgcaacctgttgttgttggagctgcaagaaagacttccagagcagttggccgagccaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 ttgcaacctgttgttgttggagctgcaagaaagacttccagagcagttggccgagccaca 862
Query: 721 aagagcttgatgaacatcatttcaggaaaggaagggacatcagaatatgatgatgatgat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 aagagcttgatgaacatcatttcaggaaaggaagggacatcagaatatgatgatgatgat 922
Query: 781 aatggcagaaattacatgtgatga 804
||||||||||||||||||||||||
Sbjct: 923 aatggcagaaattacatgtgatga 946
>gnl|LJGI|TC76755
Length = 505
Score = 157 bits (79), Expect = 1e-37
Identities = 220/268 (82%), Gaps = 18/268 (6%)
Strand = Plus / Plus
Query: 2 tgaactctctcgttgtaagctcacacacttcttcattccgcaccttcccacactcttcct 61
|||||||||||||||||||||| || ||||||| ||| || | |||||||||| | |
Sbjct: 124 tgaactctctcgttgtaagctcgcaggcttcttccttcagcgctttcccacactttcacc 183
Query: 62 caacacaaagtttcaatcttttccccaatctaagacaacccactttcctcaattttcatt 121
|| | ||||||||||||||||| | ||||| |||||||||||| ||| ||||||||
Sbjct: 184 cacccaaaagtttcaatcttttctc-aatctcagacaacccactatccgcaattttc--- 239
Query: 122 tcttctcctctaaattcaagccaccccacttcatcgcatgttgctcatctgggtcatcac 181
||||||||||||||||||||||||| |||||| ||| |||||||||||||||
Sbjct: 240 -------ctctaaattcaagccaccccacttcctcgcatattgttcatctgggtcatcat 292
Query: 182 caaatcgatcgaacccttcagaggaatcgattcttcaaaatgacatct-------ttcat 234
||||| ||||||| |||||||| ||| |||||||||||| || |||| |||||
Sbjct: 293 caaatggatcgaatccttcagatgaagtgattcttcaaaacgatatctttcatagttcat 352
Query: 235 gctgaagtcacaacccccaatgttcctt 262
|||||||||||||||||||||||||||
Sbjct: 353 actgaagtcacaacccccaatgttcctt 380