Miyakogusa Predicted Gene

Lj3g3v3639450.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3639450.1 tr|A9TS65|A9TS65_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,71.43,1e-18,seg,NULL,CUFF.46066.1
         (804 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57897 similar to UniRef100_A7QW11 Cluster: Chromosome...  1594   0.0  
gnl|LJGI|TC76755                                                      157   1e-37

>gnl|LJGI|TC57897 similar to UniRef100_A7QW11 Cluster: Chromosome undetermined
           scaffold_197, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_197,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (67%)
          Length = 1136

 Score = 1594 bits (804), Expect = 0.0
 Identities = 804/804 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaactctctcgttgtaagctcacacacttcttcattccgcaccttcccacactcttcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 atgaactctctcgttgtaagctcacacacttcttcattccgcaccttcccacactcttcc 202

                                                                       
Query: 61  tcaacacaaagtttcaatcttttccccaatctaagacaacccactttcctcaattttcat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tcaacacaaagtttcaatcttttccccaatctaagacaacccactttcctcaattttcat 262

                                                                       
Query: 121 ttcttctcctctaaattcaagccaccccacttcatcgcatgttgctcatctgggtcatca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttcttctcctctaaattcaagccaccccacttcatcgcatgttgctcatctgggtcatca 322

                                                                       
Query: 181 ccaaatcgatcgaacccttcagaggaatcgattcttcaaaatgacatctttcatgctgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ccaaatcgatcgaacccttcagaggaatcgattcttcaaaatgacatctttcatgctgaa 382

                                                                       
Query: 241 gtcacaacccccaatgttccttcatttgcttctcctgtgtccaagtttagcttcactgac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gtcacaacccccaatgttccttcatttgcttctcctgtgtccaagtttagcttcactgac 442

                                                                       
Query: 301 caagctttctttctcatcactttcattgcctgcacgacttcagtgacattcactagcctt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 caagctttctttctcatcactttcattgcctgcacgacttcagtgacattcactagcctt 502

                                                                       
Query: 361 gtttttgctgctgttcccactctatttgcaatgagaaatgctgcaatatccctttcaaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gtttttgctgctgttcccactctatttgcaatgagaaatgctgcaatatccctttcaaag 562

                                                                       
Query: 421 ttagcagatacagctcgtgaggaactccccagcaccatggctgctattaggctttcaggg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ttagcagatacagctcgtgaggaactccccagcaccatggctgctattaggctttcaggg 622

                                                                       
Query: 481 atggaaataagtgatctcacactagaattaagtgatctaagccaggaaatagcagatgga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atggaaataagtgatctcacactagaattaagtgatctaagccaggaaatagcagatgga 682

                                                                       
Query: 541 gtcaacaagtcagcccaagctttgcaagctgcagaagctggaatcaaacagattggttca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gtcaacaagtcagcccaagctttgcaagctgcagaagctggaatcaaacagattggttca 742

                                                                       
Query: 601 atggcacaagaacaaactatgtctatgattgaagagagggcaaatttgcctataatatct 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 atggcacaagaacaaactatgtctatgattgaagagagggcaaatttgcctataatatct 802

                                                                       
Query: 661 ttgcaacctgttgttgttggagctgcaagaaagacttccagagcagttggccgagccaca 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 ttgcaacctgttgttgttggagctgcaagaaagacttccagagcagttggccgagccaca 862

                                                                       
Query: 721 aagagcttgatgaacatcatttcaggaaaggaagggacatcagaatatgatgatgatgat 780
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 aagagcttgatgaacatcatttcaggaaaggaagggacatcagaatatgatgatgatgat 922

                                   
Query: 781 aatggcagaaattacatgtgatga 804
           ||||||||||||||||||||||||
Sbjct: 923 aatggcagaaattacatgtgatga 946


>gnl|LJGI|TC76755 
          Length = 505

 Score =  157 bits (79), Expect = 1e-37
 Identities = 220/268 (82%), Gaps = 18/268 (6%)
 Strand = Plus / Plus

                                                                       
Query: 2   tgaactctctcgttgtaagctcacacacttcttcattccgcaccttcccacactcttcct 61
           |||||||||||||||||||||| ||  ||||||| ||| || | |||||||||| |  | 
Sbjct: 124 tgaactctctcgttgtaagctcgcaggcttcttccttcagcgctttcccacactttcacc 183

                                                                       
Query: 62  caacacaaagtttcaatcttttccccaatctaagacaacccactttcctcaattttcatt 121
           || |  ||||||||||||||||| | ||||| |||||||||||| ||| ||||||||   
Sbjct: 184 cacccaaaagtttcaatcttttctc-aatctcagacaacccactatccgcaattttc--- 239

                                                                       
Query: 122 tcttctcctctaaattcaagccaccccacttcatcgcatgttgctcatctgggtcatcac 181
                  ||||||||||||||||||||||||| |||||| ||| ||||||||||||||| 
Sbjct: 240 -------ctctaaattcaagccaccccacttcctcgcatattgttcatctgggtcatcat 292

                                                                       
Query: 182 caaatcgatcgaacccttcagaggaatcgattcttcaaaatgacatct-------ttcat 234
           ||||| ||||||| |||||||| |||  |||||||||||| || ||||       |||||
Sbjct: 293 caaatggatcgaatccttcagatgaagtgattcttcaaaacgatatctttcatagttcat 352

                                       
Query: 235 gctgaagtcacaacccccaatgttcctt 262
            |||||||||||||||||||||||||||
Sbjct: 353 actgaagtcacaacccccaatgttcctt 380