Miyakogusa Predicted Gene
- Lj3g3v3639420.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3639420.1 tr|B9N805|B9N805_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_584526 PE=4
SV=1,43.97,0.0000000000006,ZF_C3H1,Zinc finger, CCCH-type; no
description,NULL; seg,NULL; SUBFAMILY NOT NAMED,NULL;
MAKORIN-REL,CUFF.46062.1
(1014 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82111 similar to UniRef100_Q9FWS3 Cluster: F1B16.12 p... 2010 0.0
>gnl|LJGI|TC82111 similar to UniRef100_Q9FWS3 Cluster: F1B16.12 protein; n=1;
Arabidopsis thaliana|Rep: F1B16.12 protein - Arabidopsis
thaliana (Mouse-ear cress), partial (31%)
Length = 1408
Score = 2010 bits (1014), Expect = 0.0
Identities = 1014/1014 (100%)
Strand = Plus / Plus
Query: 1 atgagagacgtttgtagaaactttcagcgaggaagttgtcaatatggagaaaggtgtaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 atgagagacgtttgtagaaactttcagcgaggaagttgtcaatatggagaaaggtgtaag 115
Query: 61 tttctacatgctgttcaaacacagagaaaacctaatcattcttaccagcaccaaaatacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 tttctacatgctgttcaaacacagagaaaacctaatcattcttaccagcaccaaaatacc 175
Query: 121 aataacccttttgggtttggctctaagtctgcatctgcctctgcctcccagcaaaggacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 aataacccttttgggtttggctctaagtctgcatctgcctctgcctcccagcaaaggacc 235
Query: 181 aacccttttggttttggctcgcagaacagctcctactcaaatgccccatctcattccgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 aacccttttggttttggctcgcagaacagctcctactcaaatgccccatctcattccgac 295
Query: 241 ttcaagcccaaccaattcaagccttttgaaaacaaatggagtcgatcttcatcccaaccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ttcaagcccaaccaattcaagccttttgaaaacaaatggagtcgatcttcatcccaaccc 355
Query: 301 cagactggtgcttcacgtcaatctgataacaattcccaatcagtgaatcataaatgcaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 cagactggtgcttcacgtcaatctgataacaattcccaatcagtgaatcataaatgcaca 415
Query: 361 gatcctgagatctgcaagcgccagattgcggaagactttgagaacgagaaaccgctttgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gatcctgagatctgcaagcgccagattgcggaagactttgagaacgagaaaccgctttgg 475
Query: 421 atacttacatgctacactcatagcagaggtgctccttgtgacattgttggtgacattagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 atacttacatgctacactcatagcagaggtgctccttgtgacattgttggtgacattagt 535
Query: 481 tatgaagaactgcgagcagccgcttatgaggatgctaagaaggggatgagcttgcaatca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 tatgaagaactgcgagcagccgcttatgaggatgctaagaaggggatgagcttgcaatca 595
Query: 541 atagttgagaaagagagaaatattctaaaatccaagttgattgaatttgagaaactgcgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 atagttgagaaagagagaaatattctaaaatccaagttgattgaatttgagaaactgcgt 655
Query: 601 tctgaaccctacaacattccactcgatttatctcttgacattcaaaatcaccaatctaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 tctgaaccctacaacattccactcgatttatctcttgacattcaaaatcaccaatctaat 715
Query: 661 gtagcccatgcaaatccattttcaccaactactcaaaatagcggtcctttgtcagtctca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 gtagcccatgcaaatccattttcaccaactactcaaaatagcggtcctttgtcagtctca 775
Query: 721 agctttagccaactgggtgcttcattgaacgcgggttttgaaaggacctctgcaccacaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 agctttagccaactgggtgcttcattgaacgcgggttttgaaaggacctctgcaccacaa 835
Query: 781 atgaacactttggcacagcctaattcctttggaagtggaggaaactttttgacatccaac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 atgaacactttggcacagcctaattcctttggaagtggaggaaactttttgacatccaac 895
Query: 841 acaccaaatctatttggtagtagcatctcaggtgttcaaagcagccccttttctgcacca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 acaccaaatctatttggtagtagcatctcaggtgttcaaagcagccccttttctgcacca 955
Query: 901 gcgcaggtgacaatgtttccgggttcaatgtcccagccccagcaatcacctgttgccttc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956 gcgcaggtgacaatgtttccgggttcaatgtcccagccccagcaatcacctgttgccttc 1015
Query: 961 aatggctctagctccactacaatgtttcagacaacatcagatgttcagttaaat 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 aatggctctagctccactacaatgtttcagacaacatcagatgttcagttaaat 1069