Miyakogusa Predicted Gene

Lj3g3v3639330.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3639330.1 tr|Q2HTX0|Q2HTX0_MEDTR Frigida-like OS=Medicago
truncatula GN=MtrDRAFT_AC149601g7v2 PE=4 SV=1,32.82,6e-18,FAMILY NOT
NAMED,NULL; seg,NULL; coiled-coil,NULL;
Frigida,Frigida-like,CUFF.46102.1
         (3156 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70495                                                      509   e-143
gnl|LJGI|GO020190                                                     170   3e-41

>gnl|LJGI|TC70495 
          Length = 537

 Score =  509 bits (257), Expect = e-143
 Identities = 263/265 (99%)
 Strand = Plus / Plus

                                                                        
Query: 2892 agttcgagttgagcaacctcaggagaagaaacgtcctattgaagcagtgcccaatgatca 2951
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    agttcgagttgagcaacctcaggagaagaaacgtcctattgaagcagtgcccaatgatca 60

                                                                        
Query: 2952 tcaattacatcagtggggtatcaacaacaaacgtcctcggacaggtgcaacacactctct 3011
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tcaattacatcagtggggtatcaacaacaaacgtcctcggacaggtgcaacacactctct 120

                                                                        
Query: 3012 gcctcgtgtcttcacttctcattaccaacataccttttgtcctagtggaatgcctgcacc 3071
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 121  gcctcgtgtcttcacttctcattacccacataccttttgtcctagtggaatgcctgcacc 180

                                                                        
Query: 3072 gtttggacttcccccaaactattatggtgctactggcggagcagattacttttgtcaccc 3131
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  gtttggacttccccccaactattatggtgctactggcggagcagattacttttgtcaccc 240

                                     
Query: 3132 taggccttacccacctttcagatga 3156
            |||||||||||||||||||||||||
Sbjct: 241  taggccttacccacctttcagatga 265


>gnl|LJGI|GO020190 
          Length = 662

 Score =  170 bits (86), Expect = 3e-41
 Identities = 122/134 (91%)
 Strand = Plus / Plus

                                                                        
Query: 1775 ctgatggaagaaatttgcagtttctctcaaatgagcccgagttgattggcaatgacattt 1834
            |||||||||||||||||||||| |||||||||||||| | || ||||||| |||||||||
Sbjct: 529  ctgatggaagaaatttgcagttgctctcaaatgagcctgcgtcgattggccatgacattt 588

                                                                        
Query: 1835 tagattgtctccaaacatcagcagatccagcagcacttgttttggatataattcagaacc 1894
            ||| |||||||||||||||| ||||||||||| |||||||||||||||||||| | ||| 
Sbjct: 589  tagcttgtctccaaacatcatcagatccagcaacacttgttttggatataatttataacg 648

                          
Query: 1895 ctattgttccacag 1908
            | ||||||||||||
Sbjct: 649  ccattgttccacag 662