Miyakogusa Predicted Gene
- Lj3g3v3613660.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3613660.1 Non Chatacterized Hit- tr|I1K124|I1K124_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,61.7,0.0000003,no description,NULL; F-box,F-box domain,
cyclin-like; FBA_1,F-box associated domain, type 1; A
Recep,CUFF.46037.1
(1218 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS318183 weakly similar to UniRef100_A7Q9Q9 Cluster: Ch... 1463 0.0
gnl|LJGI|BP069597 264 1e-69
gnl|LJGI|TC79393 103 3e-21
gnl|LJGI|TC57901 similar to UniRef100_A2Q2H0 Cluster: F-box prot... 78 1e-13
gnl|LJGI|BG662160 weakly similar to UniRef100_A7PQD5 Cluster: Ch... 74 2e-12
gnl|LJGI|TC67756 similar to UniRef100_A2Q2H0 Cluster: F-box prot... 72 9e-12
gnl|LJGI|BW594747 similar to UniRef100_Q0GJI6 Cluster: SLF-like ... 70 4e-11
gnl|LJGI|BP057238 similar to UniRef100_O48542 Cluster: Peptide t... 68 1e-10
gnl|LJGI|BW626991 weakly similar to UniRef100_A7PQD5 Cluster: Ch... 66 6e-10
gnl|LJGI|FS328144 similar to UniRef100_A7Q9Q9 Cluster: Chromosom... 64 2e-09
gnl|LJGI|TC74128 similar to UniRef100_A7Q9Q9 Cluster: Chromosome... 62 9e-09
gnl|LJGI|TC66505 similar to UniRef100_Q2HS67 Cluster: Cyclin-lik... 62 9e-09
gnl|LJGI|FS324043 weakly similar to UniRef100_Q2HWB4 Cluster: Cy... 60 3e-08
gnl|LJGI|TC73199 weakly similar to UniRef100_Q2HS67 Cluster: Cyc... 60 3e-08
gnl|LJGI|DC598731 similar to UniRef100_Q2HS69 Cluster: Cyclin-li... 58 1e-07
gnl|LJGI|TC65982 weakly similar to UniRef100_A4UV34 Cluster: F-b... 56 5e-07
gnl|LJGI|DC593954 similar to UniRef100_Q2HWB4 Cluster: Cyclin-li... 54 2e-06
>gnl|LJGI|FS318183 weakly similar to UniRef100_A7Q9Q9 Cluster: Chromosome chr5
scaffold_67, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_67, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 790
Score = 1463 bits (738), Expect = 0.0
Identities = 759/767 (98%), Gaps = 1/767 (0%)
Strand = Plus / Plus
Query: 1 atggaggaaaaaaccctaaccctaacccgtggtgtttctgttctcccatgggaactggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24 atggaggaaaaaaccctaaccctaacccgtggtgtttctgttctcccatgggaactggtg 83
Query: 61 attgaaatcttatcatggcttccggtgaagactctgttgcgattccggtgcgtgtccaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 attgaaatcttatcatggcttccggtgaagactctgttgcgattccggtgcgtgtccaag 143
Query: 121 tcatggaaatccctaatctccgacgacaaatcgttcacgaagctgcacctcaacagatcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 tcatggaaatccctaatctccgacgacaaatcgttcacgaagctgcacctcaacagatcg 203
Query: 181 cttcaaaacgagcacttcctcctgaaattagaactcaccaattttatcgaagatggcgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 cttcaaaacgagcacttcctcctgaaattagaactcaccaattttatcgaagatggcgtt 263
Query: 241 tttccgatcccggtgagtcgtttgcttaatgggccaccgtcgattgacgatgactggttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttccgatcccggtgagtcgtttgcttaatgggccaccgtcgattgacgatgactggttc 323
Query: 301 tcccgtgtcaggtacaactactcacagatcgacgatggctgtgaccgccgtttcaagtcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcccgtgtcaggtacaactactcacagatcgacgatggctgtgaccgccgtttcaagtcc 383
Query: 361 atgtactccgattactgttcccgtctcaaatctgactactcaatcctcaaatctgactac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atgtactccgattactgttcccgtctcaaatctgactactcaatcctcaaatctgactac 443
Query: 421 tcaatccttggctcctacaatggcttggtctgtttgctaggctggtatgaattttcctac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcaatccttggctcctacaatggcttggtctgtttgctaggctggtatgaattttcctac 503
Query: 481 ccaactgaacaggtctggatccgcctatggaaccctgctacacgctccatgtctcgcaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ccaactgaacaggtctggatccgcctatggaaccctgctacacgctccatgtctcgcaag 563
Query: 541 tcaccaatctgtgctgtcccctacgattcttggaaatactatggcttcggctatgatcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tcaccaatctgtgctgtcccctacgattcttggaaatactatggcttcggctatgatcat 623
Query: 601 tcacgtcacgcttacaaggtggtgatggtgctttgggattgtgatgag-nnnnnnntgga 659
|||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 624 tcacgtcacgcttacaaggtggtgatggtgctttgggattgtgatgagaaaaaaaatgga 683
Query: 660 gacaatagtttattgcatgggtgatgcttgttggagaaaggtttcgagcaaccatggttt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gacaatagtttattgcatgggtgatgcttgttggagaaaggtttcgagcaaccatggttt 743
Query: 720 cccacttcggctcaaggcattcgaaggacaattcgtggatgggtgta 766
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cccacttcggctcaaggcattcgaaggacaattcgtggatgggtgta 790
>gnl|LJGI|BP069597
Length = 408
Score = 264 bits (133), Expect = 1e-69
Identities = 136/137 (99%)
Strand = Plus / Minus
Query: 1082 ttccgttatattcgccgctcatgtgcttttgtgaagatcgtgacattgtgttgttcttaa 1141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ttccgttatattcgccgctcatgtgcttttgtgaagatcgtgacattgtgttgttcttaa 349
Query: 1142 ataaaacttggagtggtagtaatgagtatcaggctttggaagttgtcatgtataatttaa 1201
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 348 ataaaacttggagtggtagtaatgagtatcagggtttggaagttgtcatgtataatttaa 289
Query: 1202 gagataatagtgggaaa 1218
|||||||||||||||||
Sbjct: 288 gagataatagtgggaaa 272
>gnl|LJGI|TC79393
Length = 697
Score = 103 bits (52), Expect = 3e-21
Identities = 85/96 (88%)
Strand = Plus / Plus
Query: 942 ggttttgaggaattgcctgtgcctttttcatgaccataacaaaactcattttgttgtgtg 1001
||||||| |||||||||| ||||||||||||||| |||| | |||||||||||||| |||
Sbjct: 269 ggttttggggaattgcctttgcctttttcatgacgataatagaactcattttgttgggtg 328
Query: 1002 gcaaatgagagagtatggagttcacgaatcttggac 1037
| |||||| |||||||||||| | |||||||||||
Sbjct: 329 gaaaatgacagagtatggagtaccagaatcttggac 364
>gnl|LJGI|TC57901 similar to UniRef100_A2Q2H0 Cluster: F-box protein interaction
domain; n=1; Medicago truncatula|Rep: F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (9%)
Length = 1406
Score = 77.8 bits (39), Expect = 1e-13
Identities = 81/95 (85%)
Strand = Plus / Plus
Query: 943 gttttgaggaattgcctgtgcctttttcatgaccataacaaaactcattttgttgtgtgg 1002
|||||| | ||||| |||||||||||||| |||| ||| ||| ||||||| |||||||
Sbjct: 862 gttttgggaaattgtctgtgcctttttcaagaccgtaaaggaacccattttgatgtgtgg 921
Query: 1003 caaatgagagagtatggagttcacgaatcttggac 1037
|||||||||||||| ||||||| || ||||||||
Sbjct: 922 caaatgagagagtacggagttcgtgagtcttggac 956
Score = 65.9 bits (33), Expect = 6e-10
Identities = 78/93 (83%)
Strand = Plus / Plus
Query: 64 gaaatcttatcatggcttccggtgaagactctgttgcgattccggtgcgtgtccaagtca 123
||||||||||| |||||||| ||||| || ||| ||| |||| |||||| | ||| |||
Sbjct: 70 gaaatcttatcgtggcttccagtgaaaaccctgatgcaattcaagtgcgtttgcaaatca 129
Query: 124 tggaaatccctaatctccgacgacaaatcgttc 156
|||||||| || ||||| || ||||||||||||
Sbjct: 130 tggaaatcactcatctctgatgacaaatcgttc 162
>gnl|LJGI|BG662160 weakly similar to UniRef100_A7PQD5 Cluster: Chromosome chr18
scaffold_24, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 430
Score = 73.8 bits (37), Expect = 2e-12
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 64 gaaatcttatcatggcttccggtgaagactctgttgcgattccggtgcgtgtccaagtca 123
|||||||| ||||||||||||||||| ||||| |||||||| |||| ||||| ||||||
Sbjct: 29 gaaatcttgtcatggcttccggtgaaatctctggtgcgattcaggtgtgtgtctaagtca 88
Query: 124 tggaa 128
|||||
Sbjct: 89 tggaa 93
>gnl|LJGI|TC67756 similar to UniRef100_A2Q2H0 Cluster: F-box protein interaction
domain; n=1; Medicago truncatula|Rep: F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (10%)
Length = 644
Score = 71.9 bits (36), Expect = 9e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 60 gattgaaatcttatcatggcttccggtgaagactctgttgcgattccggtgcgtgtccaa 119
||||||||| ||||| |||||||| |||||||| ||| |||||||| | || || |||||
Sbjct: 151 gattgaaattttatcttggcttcctgtgaagaccctgatgcgattcagttgtgtttccaa 210
Query: 120 gtcatggaaatc 131
||||||||||||
Sbjct: 211 gtcatggaaatc 222
>gnl|LJGI|BW594747 similar to UniRef100_Q0GJI6 Cluster: SLF-like protein 1; n=1;
Antirrhinum majus|Rep: SLF-like protein 1 - Antirrhinum
majus, partial (4%)
Length = 480
Score = 69.9 bits (35), Expect = 4e-11
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 943 gttttgaggaattgcctgtgcctttttcatgaccataacaaaactcattttgttgtgtgg 1002
|||||| | ||||| |||||||||||||| |||| ||| ||| ||||||| |||||||
Sbjct: 116 gttttgggaaattgtctgtgcctttttcaagaccgtaaaggaacccattttgatgtgtgg 175
Query: 1003 caaatgagagagtatggagttcacgaatcttggac 1037
|||||||||||||| || |||| || ||||||||
Sbjct: 176 caaatgagagagtacggtgttcgagagtcttggac 210
>gnl|LJGI|BP057238 similar to UniRef100_O48542 Cluster: Peptide transporter; n=1;
Hordeum vulgare|Rep: Peptide transporter - Hordeum
vulgare, partial (2%)
Length = 434
Score = 67.9 bits (34), Expect = 1e-10
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 825 tgttactctcgaccacttggtaattgtttcctttgacatgcgtcaagaggcatatagatt 884
||||||||| ||||| ||||| ||||||| |||| |||||||| | |||||||||| |
Sbjct: 197 tgttactctagaccagttggtgattgtttgctttcacatgcgtgaggaggcatatacgta 138
Query: 885 tttgtcactgcctgagggtgttagtc 910
||||||| | || |||||||||||||
Sbjct: 137 tttgtcattaccggagggtgttagtc 112
Score = 54.0 bits (27), Expect = 2e-06
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 667 gtttattgcatgggtgatgcttgttggagaaaggtttcgagca 709
||||| |||||||||||| ||||||||||||| |||||||||
Sbjct: 349 gtttactgcatgggtgatagttgttggagaaagatttcgagca 307
>gnl|LJGI|BW626991 weakly similar to UniRef100_A7PQD5 Cluster: Chromosome chr18
scaffold_24, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 459
Score = 65.9 bits (33), Expect = 6e-10
Identities = 78/93 (83%)
Strand = Plus / Plus
Query: 64 gaaatcttatcatggcttccggtgaagactctgttgcgattccggtgcgtgtccaagtca 123
||||||||||| |||||||| ||||| || ||| ||| |||| |||||| | ||| |||
Sbjct: 128 gaaatcttatcgtggcttccagtgaaaaccctgatgcaattcaagtgcgtttgcaaatca 187
Query: 124 tggaaatccctaatctccgacgacaaatcgttc 156
|||||||| || ||||| || ||||||||||||
Sbjct: 188 tggaaatcactcatctctgatgacaaatcgttc 220
>gnl|LJGI|FS328144 similar to UniRef100_A7Q9Q9 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 760
Score = 63.9 bits (32), Expect = 2e-09
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 77 ggcttccggtgaagactctgttgcgattccggtgcgtgtccaagtcatggaa 128
|||||||||||||| |||| ||||||||||||||||| | |||||| |||||
Sbjct: 485 ggcttccggtgaagtctctcttgcgattccggtgcgtctgcaagtcctggaa 536
>gnl|LJGI|TC74128 similar to UniRef100_A7Q9Q9 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 501
Score = 61.9 bits (31), Expect = 9e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 80 ttccggtgaagactctgttgcgattccggtgcgtgtccaagtcatggaaatccct 134
||||||||||| |||| ||||||||||||||||| | |||||| ||||| |||||
Sbjct: 221 ttccggtgaagtctcttttgcgattccggtgcgtctgcaagtcctggaattccct 275
>gnl|LJGI|TC66505 similar to UniRef100_Q2HS67 Cluster: Cyclin-like F-box; F-box
protein interaction domain; n=1; Medicago
truncatula|Rep: Cyclin-like F-box; F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (17%)
Length = 1292
Score = 61.9 bits (31), Expect = 9e-09
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 841 ttggtaattgtttcctttgacatgcgtcaagaggcatatagatttttgtcactgcctgag 900
||||| ||||||||| |||||||||||||||||||||| | || |||||||| ||| ||
Sbjct: 762 ttggtgattgtttcccttgacatgcgtcaagaggcataccggttattgtcactacctcag 821
Query: 901 ggt 903
|||
Sbjct: 822 ggt 824
>gnl|LJGI|FS324043 weakly similar to UniRef100_Q2HWB4 Cluster: Cyclin-like F-box;
F-box protein interaction domain; n=1; Medicago
truncatula|Rep: Cyclin-like F-box; F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (9%)
Length = 574
Score = 60.0 bits (30), Expect = 3e-08
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 64 gaaatcttatcatggcttccggtgaagactctgttgcgattccggtgcgtgtccaagtca 123
|||||||| || ||||||||||||||||| || ||| |||| |||||| | ||| |||
Sbjct: 103 gaaatcttgtcgtggcttccggtgaagaccctcatgcaattcaagtgcgtttgcaaatca 162
Query: 124 tggaaatccctaatctccgacgacaaatcgttca 157
|||||||| || ||||| ||||||||| |||||
Sbjct: 163 tggaaatcactcatctctaacgacaaattgttca 196
>gnl|LJGI|TC73199 weakly similar to UniRef100_Q2HS67 Cluster: Cyclin-like F-box;
F-box protein interaction domain; n=1; Medicago
truncatula|Rep: Cyclin-like F-box; F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (11%)
Length = 654
Score = 60.0 bits (30), Expect = 3e-08
Identities = 78/94 (82%)
Strand = Plus / Plus
Query: 64 gaaatcttatcatggcttccggtgaagactctgttgcgattccggtgcgtgtccaagtca 123
|||||||| || ||||||||||||||||| || ||| |||| |||||| | ||| |||
Sbjct: 73 gaaatcttgtcgtggcttccggtgaagaccctcatgcaattcaagtgcgtttgcaaatca 132
Query: 124 tggaaatccctaatctccgacgacaaatcgttca 157
|||||||| || ||||| ||||||||| |||||
Sbjct: 133 tggaaatcactcatctctaacgacaaattgttca 166
>gnl|LJGI|DC598731 similar to UniRef100_Q2HS69 Cluster: Cyclin-like F-box; F-box
protein interaction domain; n=1; Medicago
truncatula|Rep: Cyclin-like F-box; F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (14%)
Length = 592
Score = 58.0 bits (29), Expect = 1e-07
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 64 gaaatcttatcatggcttccggtgaagactctgttgcgattccggtgcgtgtccaagtca 123
||||||||||||||| |||| || || ||||| |||||||| |||| || |||||||||
Sbjct: 64 gaaatcttatcatgggttcctgtaaaatctctggtgcgattcaggtgtgtatccaagtca 123
Query: 124 tggaa 128
|||||
Sbjct: 124 tggaa 128
>gnl|LJGI|TC65982 weakly similar to UniRef100_A4UV34 Cluster: F-box domain-containing
protein; n=2; Solanum|Rep: F-box domain-containing
protein - Solanum tuberosum (Potato), partial (12%)
Length = 1581
Score = 56.0 bits (28), Expect = 5e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 64 gaaatcttatcatggcttccggtgaagactctgttgcgattccggtgcgtgtccaagtca 123
|||||||| |||||||| || |||||||| || ||||||| |||||| |||||||||
Sbjct: 224 gaaatcttctcatggctacccgtgaagaccctcatgcgatttgcgtgcgtttccaagtca 283
Query: 124 tggaaatc 131
||||||||
Sbjct: 284 tggaaatc 291
Score = 54.0 bits (27), Expect = 2e-06
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 822 caatgttactctcgaccacttggtaattgtttcctttgacatg 864
|||||||||||||||||| |||| |||| |||||||||||||
Sbjct: 910 caatgttactctcgaccaactggttattgcttcctttgacatg 952
>gnl|LJGI|DC593954 similar to UniRef100_Q2HWB4 Cluster: Cyclin-like F-box; F-box
protein interaction domain; n=1; Medicago
truncatula|Rep: Cyclin-like F-box; F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (9%)
Length = 574
Score = 54.0 bits (27), Expect = 2e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 77 ggcttccggtgaagactctgttgcgattccggtgcgtgtccaagtcatggaaatccctaa 136
|||| ||||||||| | ||| |||||||||| | ||| | |||||| ||||| |||||||
Sbjct: 87 ggctcccggtgaagccgctgctgcgattccgctccgtttgcaagtcctggaattccctaa 146
Query: 137 tctccga 143
|||||||
Sbjct: 147 tctccga 153