Miyakogusa Predicted Gene
- Lj3g3v3613600.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3613600.1 tr|G7ICP1|G7ICP1_MEDTR F-box/kelch-repeat protein
OS=Medicago truncatula GN=MTR_1g071010 PE=4
SV=1,30.08,5e-19,FBA_1,F-box associated domain, type 1; F_box_assoc_1:
F-box protein interaction domain,F-box associa,CUFF.46027.1
(708 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57901 similar to UniRef100_A2Q2H0 Cluster: F-box prot... 149 3e-35
gnl|LJGI|BW594747 similar to UniRef100_Q0GJI6 Cluster: SLF-like ... 131 6e-30
gnl|LJGI|TC66505 similar to UniRef100_Q2HS67 Cluster: Cyclin-lik... 96 4e-19
gnl|LJGI|TC79393 92 6e-18
gnl|LJGI|BP057238 similar to UniRef100_O48542 Cluster: Peptide t... 62 5e-09
gnl|LJGI|TC65982 weakly similar to UniRef100_A4UV34 Cluster: F-b... 62 5e-09
gnl|LJGI|BP062289 similar to UniRef100_Q4SJI9 Cluster: Chromosom... 54 1e-06
gnl|LJGI|BP069597 54 1e-06
>gnl|LJGI|TC57901 similar to UniRef100_A2Q2H0 Cluster: F-box protein interaction
domain; n=1; Medicago truncatula|Rep: F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (9%)
Length = 1406
Score = 149 bits (75), Expect = 3e-35
Identities = 123/139 (88%)
Strand = Plus / Plus
Query: 370 gttttgaggaattgtctgtgcctttttcatgaccataagagaacgcattttgttgtgtgg 429
|||||| | |||||||||||||||||||| |||| ||| |||| ||||||| |||||||
Sbjct: 862 gttttgggaaattgtctgtgcctttttcaagaccgtaaaggaacccattttgatgtgtgg 921
Query: 430 caaatgagggagtatggagttcgggagtcttggactcggttggtgagtgtcagttatgag 489
|||||||| ||||| |||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 922 caaatgagagagtacggagttcgtgagtcttggactcggttggtctctgtcagttatgaa 981
Query: 490 catcttcgatgtgatggct 508
||||||| |||||||||||
Sbjct: 982 catcttcaatgtgatggct 1000
Score = 65.9 bits (33), Expect = 3e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 604 tataatcttaaagataatagtgtgaaatgtattcaacttcccaacaacaaaccttttttg 663
|||||||| | |||||||||||||||| ||||||||||||| ||||||||| || |||
Sbjct: 1090 tataatctaagagataatagtgtgaaacatattcaacttcccgacaacaaacgttggttg 1149
Query: 664 aatgacaatggttatgt 680
|||| | || |||||||
Sbjct: 1150 aatggctatagttatgt 1166
Score = 52.0 bits (26), Expect = 5e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 93 ggttcattgcatgggtgatagttgttggagaacgattt 130
|||| |||||| |||||||||| |||||||||||||||
Sbjct: 603 ggtttattgcaagggtgatagtggttggagaacgattt 640
>gnl|LJGI|BW594747 similar to UniRef100_Q0GJI6 Cluster: SLF-like protein 1; n=1;
Antirrhinum majus|Rep: SLF-like protein 1 - Antirrhinum
majus, partial (4%)
Length = 480
Score = 131 bits (66), Expect = 6e-30
Identities = 111/126 (88%)
Strand = Plus / Plus
Query: 370 gttttgaggaattgtctgtgcctttttcatgaccataagagaacgcattttgttgtgtgg 429
|||||| | |||||||||||||||||||| |||| ||| |||| ||||||| |||||||
Sbjct: 116 gttttgggaaattgtctgtgcctttttcaagaccgtaaaggaacccattttgatgtgtgg 175
Query: 430 caaatgagggagtatggagttcgggagtcttggactcggttggtgagtgtcagttatgag 489
|||||||| ||||| || ||||| |||||||||||||| |||||||||||||| |||||
Sbjct: 176 caaatgagagagtacggtgttcgagagtcttggactcgattggtgagtgtcagctatgaa 235
Query: 490 catctt 495
||||||
Sbjct: 236 catctt 241
>gnl|LJGI|TC66505 similar to UniRef100_Q2HS67 Cluster: Cyclin-like F-box; F-box
protein interaction domain; n=1; Medicago
truncatula|Rep: Cyclin-like F-box; F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (17%)
Length = 1292
Score = 95.6 bits (48), Expect = 4e-19
Identities = 111/132 (84%)
Strand = Plus / Plus
Query: 369 ggttttgaggaattgtctgtgcctttttcatgaccataagagaacgcattttgttgtgtg 428
||||||| ||||||| || ||||||||| ||||| ||||||||| |||||||||| ||
Sbjct: 854 ggttttggggaattgcctttgccttttttatgactttaagagaacccattttgttgcctg 913
Query: 429 gcaaatgagggagtatggagttcgggagtcttggactcggttggtgagtgtcagttatga 488
| ||||||| ||||||||| ||| ||||||||||||| ||| ||| | ||||||| ||
Sbjct: 914 gaaaatgagtgagtatggacttccagagtcttggactcctttgctgactatcagttacga 973
Query: 489 gcatcttcgatg 500
|||||||||||
Sbjct: 974 acatcttcgatg 985
Score = 77.8 bits (39), Expect = 8e-14
Identities = 93/111 (83%)
Strand = Plus / Plus
Query: 598 atcatgtataatcttaaagataatagtgtgaaatgtattcaacttcccaacaacaaacct 657
||||| |||||||| | |||||||||||||||| | || ||||| ||| |||||||| |
Sbjct: 1074 atcatatataatctaagtgataatagtgtgaaatatgttgaacttgccagcaacaaactt 1133
Query: 658 tttttgaatgacaatggttatgtggagagtctgatttcaccttgttaagat 708
| ||| ||| ||||| |||||| ||||||||| ||||||| |||||||||
Sbjct: 1134 tggttggatgccaatgattatgtagagagtctggtttcaccatgttaagat 1184
>gnl|LJGI|TC79393
Length = 697
Score = 91.7 bits (46), Expect = 6e-18
Identities = 100/118 (84%)
Strand = Plus / Plus
Query: 369 ggttttgaggaattgtctgtgcctttttcatgaccataagagaacgcattttgttgtgtg 428
||||||| ||||||| || ||||||||||||||| |||| ||||| |||||||||| |||
Sbjct: 269 ggttttggggaattgcctttgcctttttcatgacgataatagaactcattttgttgggtg 328
Query: 429 gcaaatgagggagtatggagttcgggagtcttggactcggttggtgagtgtcagttat 486
| |||||| ||||||||||| | || ||||||||||| || ||||| ||||||||
Sbjct: 329 gaaaatgacagagtatggagtaccagaatcttggactcgtatgttgagtatcagttat 386
Score = 54.0 bits (27), Expect = 1e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 93 ggttcattgcatgggtgatagttgttggaga 123
|||||||||||| ||||||||||||||||||
Sbjct: 47 ggttcattgcatcggtgatagttgttggaga 77
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 682 gagagtctgatttcaccttgttaagat 708
|||||||||||||||||||||||||||
Sbjct: 576 gagagtctgatttcaccttgttaagat 602
>gnl|LJGI|BP057238 similar to UniRef100_O48542 Cluster: Peptide transporter; n=1;
Hordeum vulgare|Rep: Peptide transporter - Hordeum
vulgare, partial (2%)
Length = 434
Score = 61.9 bits (31), Expect = 5e-09
Identities = 100/123 (81%)
Strand = Plus / Minus
Query: 100 tgcatgggtgatagttgttggagaacgattttgaacgagcctggtttcccgcttgtgcta 159
||||||||||||||||||||||||| ||||| || | ||| ||| | || || |||||
Sbjct: 343 tgcatgggtgatagttgttggagaaagatttcgagcagccctagttcctcggttttgcta 284
Query: 160 aagcaggtcaatggacaagttgtgagtggttgtgttaactggttaggacttgacaagttg 219
|||| || |||| || |||| |||| |||||||||||||||| ||||||||| |||
Sbjct: 283 cagcaattcgatggtcagtttgtaggtggctgtgttaactggttagcacttgacaacttg 224
Query: 220 aat 222
|||
Sbjct: 223 aat 221
>gnl|LJGI|TC65982 weakly similar to UniRef100_A4UV34 Cluster: F-box domain-containing
protein; n=2; Solanum|Rep: F-box domain-containing
protein - Solanum tuberosum (Potato), partial (12%)
Length = 1581
Score = 61.9 bits (31), Expect = 5e-09
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 390 cctttttcatgaccataagagaacgcattttgttgtgtggcaaatgagggagtatggagt 449
|||||| ||||||||||| || | ||||| |||||||| ||||| |||||||||
Sbjct: 1048 ccttttccatgaccataacagtatccatttatttgtgtggaaaatggtaaagtatggagc 1107
Query: 450 tcgggagtcttggactcggttggtgagtgtcagttatgagcatcttc 496
|| ||||||||||||| |||| ||||| |||||||||||| |||||
Sbjct: 1108 tctagagtcttggactcagttgttgagtatcagttatgagcgtcttc 1154
Score = 52.0 bits (26), Expect = 5e-06
Identities = 104/130 (80%)
Strand = Plus / Plus
Query: 81 aatggagacgaaggttcattgcatgggtgatagttgttggagaacgattttgaacgagcc 140
||||||||| | |||| ||||| || ||||| || ||| |||| |||||||| || ||
Sbjct: 748 aatggagacaatggtttattgcgtgaatgatattttttgtagaaagattttgagtgatcc 807
Query: 141 tggtttcccgcttgtgctaaagcaggtcaatggacaagttgtgagtggttgtgttaactg 200
| ||| ||| || ||||||| || |||| |||||| ||||| |||||||| |||||||
Sbjct: 808 ttgttccccaattttgctaaaccaaatcaaaggacaatttgtgggtggttgtcttaactg 867
Query: 201 gttaggactt 210
||||| ||||
Sbjct: 868 gttagcactt 877
>gnl|LJGI|BP062289 similar to UniRef100_Q4SJI9 Cluster: Chromosome 4 SCAF14575 whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep:, partial (0%)
Length = 394
Score = 54.0 bits (27), Expect = 1e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 682 gagagtctgatttcaccttgttaagat 708
|||||||||||||||||||||||||||
Sbjct: 78 gagagtctgatttcaccttgttaagat 52
>gnl|LJGI|BP069597
Length = 408
Score = 54.0 bits (27), Expect = 1e-06
Identities = 92/113 (81%), Gaps = 3/113 (2%)
Strand = Plus / Minus
Query: 599 tcatgtataatcttaaagataatagtgtgaaatgt---attcaacttcccaacaacaaac 655
||||||||||| | | ||||||||||| ||||||| |||||||||| |||||||||||
Sbjct: 303 tcatgtataatttaagagataatagtgggaaatgtgttattcaacttcgcaacaacaaac 244
Query: 656 cttttttgaatgacaatggttatgtggagagtctgatttcaccttgttaagat 708
|| ||| || |||| |||||| ||||| || ||||||||||| |||||
Sbjct: 243 tttcattgtgtgggaatgattatgttcagagtttggtttcaccttgtcaagat 191