Miyakogusa Predicted Gene
- Lj3g3v3599500.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3599500.1 Non Chatacterized Hit- tr|D7KN82|D7KN82_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,37.91,1e-18,seg,NULL,CUFF.46038.1
(963 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64193 similar to UniRef100_A7P0C9 Cluster: Chromosome... 1909 0.0
gnl|LJGI|TC73694 similar to UniRef100_A7P0C9 Cluster: Chromosome... 1292 0.0
gnl|LJGI|TC66188 weakly similar to UniRef100_A7P0C9 Cluster: Chr... 1229 0.0
gnl|LJGI|AV778842 homologue to UniRef100_A7P0C9 Cluster: Chromos... 145 6e-34
gnl|LJGI|BW599940 66 4e-10
>gnl|LJGI|TC64193 similar to UniRef100_A7P0C9 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (69%)
Length = 1419
Score = 1909 bits (963), Expect = 0.0
Identities = 963/963 (100%)
Strand = Plus / Plus
Query: 1 atgacggtgctgccgctgcttgctttgtttgtcgcggctctggttccgattcacggagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 atgacggtgctgccgctgcttgctttgtttgtcgcggctctggttccgattcacggagga 186
Query: 61 gtgtttgcctccaccgtccccgcgttcctttggtcatcccattataatctggtttcagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 gtgtttgcctccaccgtccccgcgttcctttggtcatcccattataatctggtttcagac 246
Query: 121 aatgggttgaaggaatctgtaaattatcaggtcatttctccaaaagatcttgcaaagtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 aatgggttgaaggaatctgtaaattatcaggtcatttctccaaaagatcttgcaaagtct 306
Query: 181 gtttcatctgaggcaggctggtcaaattttctgtgcaaaggaaataaatttcaggagcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gtttcatctgaggcaggctggtcaaattttctgtgcaaaggaaataaatttcaggagcct 366
Query: 241 ctcgatttggcacttctattcattggtggagagttgcaatcttcggatttaagtgtatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ctcgatttggcacttctattcattggtggagagttgcaatcttcggatttaagtgtatac 426
Query: 301 gagcaggcagactcagttcttctagacttgctcgagatatcttttgccagatccaacact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gagcaggcagactcagttcttctagacttgctcgagatatcttttgccagatccaacact 486
Query: 361 tccatggcgtttccctatgtttctgcatcagaggatgtgagtttggaagacttgttggtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tccatggcgtttccctatgtttctgcatcagaggatgtgagtttggaagacttgttggtt 546
Query: 421 tcaggatttactgaagcctgcggagatgatttaggaattggcaatattgcctccctagga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tcaggatttactgaagcctgcggagatgatttaggaattggcaatattgcctccctagga 606
Query: 481 tcttgctccagggacaatacaaatcatgaacaaactggagctttacactcggttcaagac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tcttgctccagggacaatacaaatcatgaacaaactggagctttacactcggttcaagac 666
Query: 541 tatttgaccaagaggaaggaagagagtcacagtgggaaaacagatttggttatgttctgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tatttgaccaagaggaaggaagagagtcacagtgggaaaacagatttggttatgttctgc 726
Query: 601 aacggacactctcaagctttgaaaaatgttgacagaacacaatctgaaggtgaagtttta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 aacggacactctcaagctttgaaaaatgttgacagaacacaatctgaaggtgaagtttta 786
Query: 661 tctgagcttatcagatctgtggaagaatctggggcaaagtatgcagttctctatgtatca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 tctgagcttatcagatctgtggaagaatctggggcaaagtatgcagttctctatgtatca 846
Query: 721 gatccctcgaggtcaatcaagtatccttcttacagagaactgcaaagatttctagcagaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 gatccctcgaggtcaatcaagtatccttcttacagagaactgcaaagatttctagcagaa 906
Query: 781 agtacaaatggaaatgagtcctccaatgccacgatttgcaatccagtgtgccagcttgca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 agtacaaatggaaatgagtcctccaatgccacgatttgcaatccagtgtgccagcttgca 966
Query: 841 tcatcccttctggagggacttatagtgggaatagttctgttaataattttgatatcgggc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 tcatcccttctggagggacttatagtgggaatagttctgttaataattttgatatcgggc 1026
Query: 901 ctttgctgtatgatgggaattgacaccccaacaagatttgagacgccacaagagtcatga 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 ctttgctgtatgatgggaattgacaccccaacaagatttgagacgccacaagagtcatga 1086
Query: 961 tcc 963
|||
Sbjct: 1087 tcc 1089
>gnl|LJGI|TC73694 similar to UniRef100_A7P0C9 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (76%)
Length = 1418
Score = 1292 bits (652), Expect = 0.0
Identities = 652/652 (100%)
Strand = Plus / Plus
Query: 1 atgacggtgctgccgctgcttgctttgtttgtcgcggctctggttccgattcacggagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 atgacggtgctgccgctgcttgctttgtttgtcgcggctctggttccgattcacggagga 210
Query: 61 gtgtttgcctccaccgtccccgcgttcctttggtcatcccattataatctggtttcagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gtgtttgcctccaccgtccccgcgttcctttggtcatcccattataatctggtttcagac 270
Query: 121 aatgggttgaaggaatctgtaaattatcaggtcatttctccaaaagatcttgcaaagtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aatgggttgaaggaatctgtaaattatcaggtcatttctccaaaagatcttgcaaagtct 330
Query: 181 gtttcatctgaggcaggctggtcaaattttctgtgcaaaggaaataaatttcaggagcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gtttcatctgaggcaggctggtcaaattttctgtgcaaaggaaataaatttcaggagcct 390
Query: 241 ctcgatttggcacttctattcattggtggagagttgcaatcttcggatttaagtgtatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ctcgatttggcacttctattcattggtggagagttgcaatcttcggatttaagtgtatac 450
Query: 301 gagcaggcagactcagttcttctagacttgctcgagatatcttttgccagatccaacact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gagcaggcagactcagttcttctagacttgctcgagatatcttttgccagatccaacact 510
Query: 361 tccatggcgtttccctatgtttctgcatcagaggatgtgagtttggaagacttgttggtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 tccatggcgtttccctatgtttctgcatcagaggatgtgagtttggaagacttgttggtt 570
Query: 421 tcaggatttactgaagcctgcggagatgatttaggaattggcaatattgcctccctagga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 tcaggatttactgaagcctgcggagatgatttaggaattggcaatattgcctccctagga 630
Query: 481 tcttgctccagggacaatacaaatcatgaacaaactggagctttacactcggttcaagac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tcttgctccagggacaatacaaatcatgaacaaactggagctttacactcggttcaagac 690
Query: 541 tatttgaccaagaggaaggaagagagtcacagtgggaaaacagatttggttatgttctgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tatttgaccaagaggaaggaagagagtcacagtgggaaaacagatttggttatgttctgc 750
Query: 601 aacggacactctcaagctttgaaaaatgttgacagaacacaatctgaaggtg 652
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 aacggacactctcaagctttgaaaaatgttgacagaacacaatctgaaggtg 802
Score = 626 bits (316), Expect = e-179
Identities = 316/316 (100%)
Strand = Plus / Plus
Query: 648 aggtgaagttttatctgagcttatcagatctgtggaagaatctggggcaaagtatgcagt 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 aggtgaagttttatctgagcttatcagatctgtggaagaatctggggcaaagtatgcagt 941
Query: 708 tctctatgtatcagatccctcgaggtcaatcaagtatccttcttacagagaactgcaaag 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942 tctctatgtatcagatccctcgaggtcaatcaagtatccttcttacagagaactgcaaag 1001
Query: 768 atttctagcagaaagtacaaatggaaatgagtcctccaatgccacgatttgcaatccagt 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 atttctagcagaaagtacaaatggaaatgagtcctccaatgccacgatttgcaatccagt 1061
Query: 828 gtgccagcttgcatcatcccttctggagggacttatagtgggaatagttctgttaataat 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 gtgccagcttgcatcatcccttctggagggacttatagtgggaatagttctgttaataat 1121
Query: 888 tttgatatcgggcctttgctgtatgatgggaattgacaccccaacaagatttgagacgcc 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1122 tttgatatcgggcctttgctgtatgatgggaattgacaccccaacaagatttgagacgcc 1181
Query: 948 acaagagtcatgatcc 963
||||||||||||||||
Sbjct: 1182 acaagagtcatgatcc 1197
>gnl|LJGI|TC66188 weakly similar to UniRef100_A7P0C9 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (31%)
Length = 812
Score = 1229 bits (620), Expect = 0.0
Identities = 620/620 (100%)
Strand = Plus / Plus
Query: 1 atgacggtgctgccgctgcttgctttgtttgtcgcggctctggttccgattcacggagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 atgacggtgctgccgctgcttgctttgtttgtcgcggctctggttccgattcacggagga 252
Query: 61 gtgtttgcctccaccgtccccgcgttcctttggtcatcccattataatctggtttcagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gtgtttgcctccaccgtccccgcgttcctttggtcatcccattataatctggtttcagac 312
Query: 121 aatgggttgaaggaatctgtaaattatcaggtcatttctccaaaagatcttgcaaagtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aatgggttgaaggaatctgtaaattatcaggtcatttctccaaaagatcttgcaaagtct 372
Query: 181 gtttcatctgaggcaggctggtcaaattttctgtgcaaaggaaataaatttcaggagcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gtttcatctgaggcaggctggtcaaattttctgtgcaaaggaaataaatttcaggagcct 432
Query: 241 ctcgatttggcacttctattcattggtggagagttgcaatcttcggatttaagtgtatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ctcgatttggcacttctattcattggtggagagttgcaatcttcggatttaagtgtatac 492
Query: 301 gagcaggcagactcagttcttctagacttgctcgagatatcttttgccagatccaacact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gagcaggcagactcagttcttctagacttgctcgagatatcttttgccagatccaacact 552
Query: 361 tccatggcgtttccctatgtttctgcatcagaggatgtgagtttggaagacttgttggtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tccatggcgtttccctatgtttctgcatcagaggatgtgagtttggaagacttgttggtt 612
Query: 421 tcaggatttactgaagcctgcggagatgatttaggaattggcaatattgcctccctagga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tcaggatttactgaagcctgcggagatgatttaggaattggcaatattgcctccctagga 672
Query: 481 tcttgctccagggacaatacaaatcatgaacaaactggagctttacactcggttcaagac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tcttgctccagggacaatacaaatcatgaacaaactggagctttacactcggttcaagac 732
Query: 541 tatttgaccaagaggaaggaagagagtcacagtgggaaaacagatttggttatgttctgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 tatttgaccaagaggaaggaagagagtcacagtgggaaaacagatttggttatgttctgc 792
Query: 601 aacggacactctcaagcttt 620
||||||||||||||||||||
Sbjct: 793 aacggacactctcaagcttt 812
>gnl|LJGI|AV778842 homologue to UniRef100_A7P0C9 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 529
Score = 145 bits (73), Expect = 6e-34
Identities = 91/97 (93%)
Strand = Plus / Minus
Query: 867 gggaatagttctgttaataattttgatatcgggcctttgctgtatgatgggaattgacac 926
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 343 gggaatagttctgttaataattttgatatcgggcctgtgctgtatgatgggaattgacac 284
Query: 927 cccaacaagatttgagacgccacaagagtcatgatcc 963
||| ||| |||||||||||||| ||||||||||||
Sbjct: 283 ccccacagactttgagacgccacacgagtcatgatcc 247
>gnl|LJGI|BW599940
Length = 459
Score = 65.9 bits (33), Expect = 4e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 318 tcttctagacttgctcgagatatcttttgccagatccaacacttccatggcgtttcccta 377
||||||||||| |||| | ||||||||||||| ||||||| |||||| | |||||| ||
Sbjct: 389 tcttctagactggctctatatatcttttgccaaatccaacgcttccaagacgtttctctc 448
Query: 378 tgtttctgc 386
|||||||||
Sbjct: 449 tgtttctgc 457