Miyakogusa Predicted Gene

Lj3g3v3599430.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3599430.1 Non Chatacterized Hit- tr|B9RIF3|B9RIF3_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,59.27,0,Fucose-specific lectin,NULL; seg,NULL,CUFF.46014.1
         (2829 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78412 similar to UniRef100_A7PQV5 Cluster: Chromosome...   289   5e-77

>gnl|LJGI|TC78412 similar to UniRef100_A7PQV5 Cluster: Chromosome chr6 scaffold_25,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_25, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (5%)
          Length = 648

 Score =  289 bits (146), Expect = 5e-77
 Identities = 149/150 (99%)
 Strand = Plus / Plus

                                                                        
Query: 2680 tctgccatatttgagctcagagatggcaggttggcagaaataaaactcatagaggagaca 2739
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tctgccatatttgagctcagagatggcaggttggcagaaataaaactcatagaggagaca 60

                                                                        
Query: 2740 aaatgggtctggtcacggatcattggcactccaaacagtttatgcttagagaattattgg 2799
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 61   aaatgggtctggtcacggatcattggcactccgaacagtttatgcttagagaattattgg 120

                                          
Query: 2800 attacagtagcagcagcatcttcataagat 2829
            ||||||||||||||||||||||||||||||
Sbjct: 121  attacagtagcagcagcatcttcataagat 150