Miyakogusa Predicted Gene

Lj3g3v3579340.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3579340.2 Non Chatacterized Hit- tr|I1INV3|I1INV3_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,34.78,0.0000000007,FYVE/PHD zinc finger,Zinc finger,
FYVE/PHD-type; no description,Zinc finger, RING/FYVE/PHD-type;
seg,CUFF.46012.2
         (567 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV407042 similar to UniRef100_A7PQX5 Cluster: Chromosom...   809   0.0  

>gnl|LJGI|AV407042 similar to UniRef100_A7PQX5 Cluster: Chromosome chr6 scaffold_25,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_25, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (4%)
          Length = 439

 Score =  809 bits (408), Expect = 0.0
 Identities = 408/408 (100%)
 Strand = Plus / Plus

                                                                       
Query: 94  gtgacctgtcagaagtccatggaaactggcaaatggaagaagttggtagtaacttctaaa 153
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32  gtgacctgtcagaagtccatggaaactggcaaatggaagaagttggtagtaacttctaaa 91

                                                                       
Query: 154 cgtaagcgaaccggttacagttactggcttaatggtctttggctgtcgagaaagccaaat 213
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  cgtaagcgaaccggttacagttactggcttaatggtctttggctgtcgagaaagccaaat 151

                                                                       
Query: 214 gatgaacgagtaatgctgtttaaagagaaaaagcatgttgtctcttccaaagatttttct 273
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 gatgaacgagtaatgctgtttaaagagaaaaagcatgttgtctcttccaaagatttttct 211

                                                                       
Query: 274 ggctcccgtgaccgtcctaaatgctgcctttgctgtggagatggatgcacgttaaattat 333
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ggctcccgtgaccgtcctaaatgctgcctttgctgtggagatggatgcacgttaaattat 271

                                                                       
Query: 334 attgcttgtgaaatctgtggagagtggtttcatggagatgcatttgggctcactgtagaa 393
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 attgcttgtgaaatctgtggagagtggtttcatggagatgcatttgggctcactgtagaa 331

                                                                       
Query: 394 aatgtaggacaacttattggatttaggtgccatgtatgtcgtgatagggatgctccgatc 453
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 aatgtaggacaacttattggatttaggtgccatgtatgtcgtgatagggatgctccgatc 391

                                                           
Query: 454 tgcccccatatgaacagtagtgcattgtctctcccaaaaaacaatgct 501
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tgcccccatatgaacagtagtgcattgtctctcccaaaaaacaatgct 439