Miyakogusa Predicted Gene

Lj3g3v3579340.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3579340.1 Non Chatacterized Hit- tr|I1LPD9|I1LPD9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23732
PE,68.29,0,ZF_PHD_1,Zinc finger, PHD-type, conserved site; PHD,Zinc
finger, PHD-finger; DDT,DDT domain; domain ,CUFF.46012.1
         (5205 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV407042 similar to UniRef100_A7PQX5 Cluster: Chromosom...   809   0.0  

>gnl|LJGI|AV407042 similar to UniRef100_A7PQX5 Cluster: Chromosome chr6 scaffold_25,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_25, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (4%)
          Length = 439

 Score =  809 bits (408), Expect = 0.0
 Identities = 408/408 (100%)
 Strand = Plus / Plus

                                                                        
Query: 4603 gtgacctgtcagaagtccatggaaactggcaaatggaagaagttggtagtaacttctaaa 4662
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32   gtgacctgtcagaagtccatggaaactggcaaatggaagaagttggtagtaacttctaaa 91

                                                                        
Query: 4663 cgtaagcgaaccggttacagttactggcttaatggtctttggctgtcgagaaagccaaat 4722
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92   cgtaagcgaaccggttacagttactggcttaatggtctttggctgtcgagaaagccaaat 151

                                                                        
Query: 4723 gatgaacgagtaatgctgtttaaagagaaaaagcatgttgtctcttccaaagatttttct 4782
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152  gatgaacgagtaatgctgtttaaagagaaaaagcatgttgtctcttccaaagatttttct 211

                                                                        
Query: 4783 ggctcccgtgaccgtcctaaatgctgcctttgctgtggagatggatgcacgttaaattat 4842
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212  ggctcccgtgaccgtcctaaatgctgcctttgctgtggagatggatgcacgttaaattat 271

                                                                        
Query: 4843 attgcttgtgaaatctgtggagagtggtttcatggagatgcatttgggctcactgtagaa 4902
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272  attgcttgtgaaatctgtggagagtggtttcatggagatgcatttgggctcactgtagaa 331

                                                                        
Query: 4903 aatgtaggacaacttattggatttaggtgccatgtatgtcgtgatagggatgctccgatc 4962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332  aatgtaggacaacttattggatttaggtgccatgtatgtcgtgatagggatgctccgatc 391

                                                            
Query: 4963 tgcccccatatgaacagtagtgcattgtctctcccaaaaaacaatgct 5010
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392  tgcccccatatgaacagtagtgcattgtctctcccaaaaaacaatgct 439