Miyakogusa Predicted Gene

Lj3g3v3541690.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3541690.1 Non Chatacterized Hit- tr|I1KRW3|I1KRW3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.50607
PE,67.85,0,seg,NULL; Urb2,Nucleolar 27S pre-rRNA processing,
Urb2/Npa2, C-terminal,CUFF.45977.1
         (6156 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV778017 similar to UniRef100_A7P845 Cluster: Chromosom...   406   e-112

>gnl|LJGI|AV778017 similar to UniRef100_A7P845 Cluster: Chromosome chr3 scaffold_8,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr3 scaffold_8, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (3%)
          Length = 509

 Score =  406 bits (205), Expect = e-112
 Identities = 205/205 (100%)
 Strand = Plus / Minus

                                                                        
Query: 5952 ttcaggatatggaccgagaagaagtggtatcagaagagaagtagatgaagctctaagacc 6011
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509  ttcaggatatggaccgagaagaagtggtatcagaagagaagtagatgaagctctaagacc 450

                                                                        
Query: 6012 aggtgtctatgctttgatagatgcttgctcagttgatgatctccaatatcttcacactgt 6071
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449  aggtgtctatgctttgatagatgcttgctcagttgatgatctccaatatcttcacactgt 390

                                                                        
Query: 6072 ttttggagagggaccttgcagaaataccttggcaagtcttcaacatgattacaaactcaa 6131
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389  ttttggagagggaccttgcagaaataccttggcaagtcttcaacatgattacaaactcaa 330

                                     
Query: 6132 ttttaaatatgaaggaaaagtgtga 6156
            |||||||||||||||||||||||||
Sbjct: 329  ttttaaatatgaaggaaaagtgtga 305