Miyakogusa Predicted Gene

Lj3g3v3541670.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3541670.1 Non Chatacterized Hit- tr|B6U9Q2|B6U9Q2_MAIZE
Putative uncharacterized protein OS=Zea mays PE=2
SV=1,42.97,3e-18,seg,NULL,CUFF.45967.1
         (390 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC61781 weakly similar to UniRef100_A7P023 Cluster: Chr...   773   0.0  

>gnl|LJGI|TC61781 weakly similar to UniRef100_A7P023 Cluster: Chromosome chr6
           scaffold_3, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (13%)
          Length = 869

 Score =  773 bits (390), Expect = 0.0
 Identities = 390/390 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcttatgatagaaacagaggatcctctgttatggaagggttcactctgaatcccctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 atggcttatgatagaaacagaggatcctctgttatggaagggttcactctgaatcccctg 254

                                                                       
Query: 61  ccatatcctgttctgttaatcttagcactgatcttcatcttccttggaatatcatggtac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ccatatcctgttctgttaatcttagcactgatcttcatcttccttggaatatcatggtac 314

                                                                       
Query: 121 ctttcatatgaagaagttgttgaaactgctcaagaacaatttgggtgggttctgtttgct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ctttcatatgaagaagttgttgaaactgctcaagaacaatttgggtgggttctgtttgct 374

                                                                       
Query: 181 actccagtggtgctaatacttttagttcgttggctatcttccatggagaacacagattgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 actccagtggtgctaatacttttagttcgttggctatcttccatggagaacacagattgg 434

                                                                       
Query: 241 ttctctggtttgtctccatggagtgggcgcgggagaatctacgaaggctcatcagaaggg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ttctctggtttgtctccatggagtgggcgcgggagaatctacgaaggctcatcagaaggg 494

                                                                       
Query: 301 agctctccatggggtgtggctgctttgattgtggtggtgctgataatggtgcaatttcaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 agctctccatggggtgtggctgctttgattgtggtggtgctgataatggtgcaatttcaa 554

                                         
Query: 361 tccaacttccttgaaagctggtttccttga 390
           ||||||||||||||||||||||||||||||
Sbjct: 555 tccaacttccttgaaagctggtttccttga 584