Miyakogusa Predicted Gene
- Lj3g3v3530630.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3530630.3 Non Chatacterized Hit- tr|F0ZRI4|F0ZRI4_DICPU
Putative uncharacterized protein OS=Dictyostelium
purp,31.02,2e-16,seg,NULL; SUBFAMILY NOT NAMED,NULL;
TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT,NULL;
TRAP_alpha,Tr,CUFF.46210.3
(903 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64582 1407 0.0
gnl|LJGI|AV779649 402 e-111
gnl|LJGI|TC77491 224 7e-58
gnl|LJGI|AV772436 weakly similar to UniRef100_A7RQ74 Cluster: Pr... 170 1e-41
gnl|LJGI|AU089359 109 3e-23
>gnl|LJGI|TC64582
Length = 1144
Score = 1407 bits (710), Expect = 0.0
Identities = 710/710 (100%)
Strand = Plus / Plus
Query: 194 aagttgctatgtgccaatctgactctgatggagctgtggatgccactgacgaagcgagtg 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 aagttgctatgtgccaatctgactctgatggagctgtggatgccactgacgaagcgagtg 206
Query: 254 atattggcatcgttggtgatgatgctcaagactatggtggtgagaccttcacctctgctc 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 atattggcatcgttggtgatgatgctcaagactatggtggtgagaccttcacctctgctc 266
Query: 314 cgggaattgaaacaataagcgtatttccaaaaaatagcgcaagattggtaactgccggag 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cgggaattgaaacaataagcgtatttccaaaaaatagcgcaagattggtaactgccggag 326
Query: 374 aagatacagagctgctcgttggtgtgaaaaataatggagagtcaagtttgaatgttgttg 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aagatacagagctgctcgttggtgtgaaaaataatggagagtcaagtttgaatgttgttg 386
Query: 434 caatcagggccagtgttcaccttccctttgatcatcgcatgctcgttcaaaatcttactg 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 caatcagggccagtgttcaccttccctttgatcatcgcatgctcgttcaaaatcttactg 446
Query: 494 ctcagattttcaacaatggttcagtaccatcctcagcacaggctactttcccatatttgt 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ctcagattttcaacaatggttcagtaccatcctcagcacaggctactttcccatatttgt 506
Query: 554 ttgcagtcagcaagttcttgcagcctggaacttttgatcttgtgggcagtattgtatatg 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ttgcagtcagcaagttcttgcagcctggaacttttgatcttgtgggcagtattgtatatg 566
Query: 614 agatagaagacaatccgtatcaaaccaccttctttaatggcactattgaagttgttgaag 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 agatagaagacaatccgtatcaaaccaccttctttaatggcactattgaagttgttgaag 626
Query: 674 ctggtggctttcttagcattgaatctgtttttcttgttactcttggagctgccctcctgg 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ctggtggctttcttagcattgaatctgtttttcttgttactcttggagctgccctcctgg 686
Query: 734 tcctccttgggctatggattcatggtcaaatacaaaacctgtctaagaaaacaaagaggg 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tcctccttgggctatggattcatggtcaaatacaaaacctgtctaagaaaacaaagaggg 746
Query: 794 ctccaaaagttgaagttgggactaggagtatcgatgcttcaacagatgaatggctacagg 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ctccaaaagttgaagttgggactaggagtatcgatgcttcaacagatgaatggctacagg 806
Query: 854 gaactgcatatgcccagtctctgtcaagcaaatcaaagaagaagaagtag 903
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 gaactgcatatgcccagtctctgtcaagcaaatcaaagaagaagaagtag 856
Score = 202 bits (102), Expect = 3e-51
Identities = 102/102 (100%)
Strand = Plus / Plus
Query: 50 catatctctggttttcatcgttgaaaatcaacacttctcattttcatctgcaaattctga 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 catatctctggttttcatcgttgaaaatcaacacttctcattttcatctgcaaattctga 62
Query: 110 aaccaacaccttccactatggcttccatcaacagcttttgga 151
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 aaccaacaccttccactatggcttccatcaacagcttttgga 104
>gnl|LJGI|AV779649
Length = 530
Score = 402 bits (203), Expect = e-111
Identities = 278/299 (92%), Gaps = 3/299 (1%)
Strand = Plus / Minus
Query: 607 gtatatgagatagaagacaatccgtatcaaaccaccttctttaatggcactattgaagtt 666
|||||||||||||||||| |||| |||| ||||||| || |||||||||||| ||||||
Sbjct: 530 gtatatgagatagaagacgatccctatccaaccaccctccctaatggcactatcgaagtt 471
Query: 667 gttgaagctggtggctttcttagcattgaatctgtttttcttgttactcttggagctgcc 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gttgaagctggtggctttcttagcattgaatctgtttttcttgttactcttggagctgcc 411
Query: 727 ctcctggtcctccttgggctatggattcatggtcaaatacaaaacctgtctaagaaaaca 786
|||| ||||||||||||||||||||||||||||||||||| |||||||||| || ||||
Sbjct: 410 ctcccggtcctccttgggctatggattcatggtcaaataccaaacctgtctcagtaaac- 352
Query: 787 aagag-ggctccaaaagttgaagttgggactaggagtatcgatgcttcaacagatgaatg 845
||||| |||||| || |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 351 aagagcggctccctaacctgaagttgggactaggagtatcgatgcttcaacagatgcatg 292
Query: 846 gctacagggaactgcatatgcccagtctctgtcaag-caaatcaaagaagaagaagtag 903
|||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||
Sbjct: 291 gctacagggaactgcatatgcccagtctctgtcaagccacatccaagaagaagaagtag 233
>gnl|LJGI|TC77491
Length = 578
Score = 224 bits (113), Expect = 7e-58
Identities = 122/125 (97%)
Strand = Plus / Plus
Query: 779 agaaaacaaagagggctccaaaagttgaagttgggactaggagtatcgatgcttcaacag 838
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 agaaaacaaagagggctcccaaagttgaagttgggactaggagtatcgatgcttcaacag 172
Query: 839 atgaatggctacagggaactgcatatgcccagtctctgtcaagcaaatcaaagaagaaga 898
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 173 atgaatggctacagggaactgcatatgcccagtctctgtcaagccaatccaagaagaaga 232
Query: 899 agtag 903
|||||
Sbjct: 233 agtag 237
>gnl|LJGI|AV772436 weakly similar to UniRef100_A7RQ74 Cluster: Predicted protein; n=1;
Nematostella vectensis|Rep: Predicted protein -
Nematostella vectensis (Starlet sea anemone), partial
(7%)
Length = 410
Score = 170 bits (86), Expect = 1e-41
Identities = 129/142 (90%), Gaps = 1/142 (0%)
Strand = Plus / Minus
Query: 763 atacaaaacctgtctaagaaaacaaagagggctccaaaagttgaagttgggactaggagt 822
|||| ||||| ||||||| |||| ||||||||||| || ||||||||||||||||||||
Sbjct: 410 ataccaaacccgtctaaggaaaccaagagggctccctaacttgaagttgggactaggagt 351
Query: 823 atcgatgcttcaacagatgaatggctaca-gggaactgcatatgcccagtctctgtcaag 881
||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| ||
Sbjct: 350 atcgatgcttctacagatgaatggctacacgggaactgcatatgccccgtctctgtctag 291
Query: 882 caaatcaaagaagaagaagtag 903
| |||| |||||||||||||||
Sbjct: 290 ccaatccaagaagaagaagtag 269
>gnl|LJGI|AU089359
Length = 103
Score = 109 bits (55), Expect = 3e-23
Identities = 93/104 (89%), Gaps = 2/104 (1%)
Strand = Plus / Plus
Query: 220 gatggagctgtggatgccactgacgaagcgagtgatattggcatcgttggtgatgatgct 279
|||||||||||||||||| |||||||| ||||| ||| ||||||| | ||||||||||||
Sbjct: 1 gatggagctgtggatgcc-ctgacgaatcgagtnatagtggcatcntcggtgatgatgct 59
Query: 280 caagactatggtggt-gagaccttcacctctgctccgggaattg 322
||| || |||||||| || ||||||||||||||||| |||||||
Sbjct: 60 caacaccatggtggtgganaccttcacctctgctcccggaattg 103