Miyakogusa Predicted Gene

Lj3g3v3527570.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3527570.1 tr|Q9SD22|Q9SD22_ARATH AT3g51250/F24M12_290
OS=Arabidopsis thaliana GN=F24M12.290 PE=2
SV=1,69.44,4e-19,Senescence,Senescence/spartin-associated; GB DEF:
PUTATIVE SENESCENCE-ASSOCIATED PROTEIN,NULL; FAMIL,CUFF.45958.1
         (219 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77513 similar to UniRef100_A7QDV5 Cluster: Chromosome...   339   4e-93

>gnl|LJGI|TC77513 similar to UniRef100_A7QDV5 Cluster: Chromosome chr4 scaffold_83,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr4 scaffold_83, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (72%)
          Length = 1438

 Score =  339 bits (171), Expect = 4e-93
 Identities = 214/228 (93%), Gaps = 9/228 (3%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgtccacttcatcagttgttaccaccggactcgtttcacataaatatggagaagaagca 60
            ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| 
Sbjct: 1054 atgtctacttcatcagttgttaccaccggactagtttcacataaatatggagaagaagct 1113

                                                                        
Query: 61   gctcaggttacaaatgaaggccttgacgctgcagggcatgcaattggaacagcttggact 120
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1114 gctcaggttacaaatgaaggccttgatgctgcagggcatgcaattggaacagcttggact 1173

                                                                        
Query: 121  gtgttcaaacttaggaaagcactcaacccaaagagagtgatcaaacca--aac------- 171
            ||||||||||||||||||||||||||||||||||| ||||||||||||  |||       
Sbjct: 1174 gtgttcaaacttaggaaagcactcaacccaaagagtgtgatcaaaccaacaacactagct 1233

                                                            
Query: 172  aaagctgctgcccgagcaagctctgctgaactgaaggctaagaaataa 219
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1234 aaagctgctgcccgagcaagctctgctgaactgaaggctaagaaataa 1281