Miyakogusa Predicted Gene
- Lj3g3v3525970.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3525970.1 tr|G7IKW7|G7IKW7_MEDTR SNW domain-containing
protein OS=Medicago truncatula GN=MTR_2g030450 PE=4
SV=,87.74,0,seg,NULL; SKIP_SNW,SKI-interacting protein SKIP, SNW
domain; coiled-coil,NULL; NUCLEAR PROTEIN SKIP-,CUFF.45943.1
(779 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82121 similar to UniRef100_Q3I4X9 Cluster: GAMYB-bind... 1166 0.0
gnl|LJGI|TC69960 similar to UniRef100_Q3I4X9 Cluster: GAMYB-bind... 835 0.0
>gnl|LJGI|TC82121 similar to UniRef100_Q3I4X9 Cluster: GAMYB-binding protein; n=1;
Glycine max|Rep: GAMYB-binding protein - Glycine max
(Soybean), partial (31%)
Length = 837
Score = 1166 bits (588), Expect = 0.0
Identities = 588/588 (100%)
Strand = Plus / Plus
Query: 1 atggcagctttgaaagagcttctccctcaacccaaatcatcttccaccacttactacgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 atggcagctttgaaagagcttctccctcaacccaaatcatcttccaccacttactacgac 309
Query: 61 cacagcaacgatccatggttcaagcagaggttcacctcatcggaggaggaaaaggcctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 cacagcaacgatccatggttcaagcagaggttcacctcatcggaggaggaaaaggcctcc 369
Query: 121 gctgcgatcaagcagaagccggtgccgccatacctcaagcgcgccggcttcgttcctcgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gctgcgatcaagcagaagccggtgccgccatacctcaagcgcgccggcttcgttcctcgc 429
Query: 181 agagtcgaggatttcggggacggcggagccttccccgaaatccacgtcgcacagtatcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 agagtcgaggatttcggggacggcggagccttccccgaaatccacgtcgcacagtatcct 489
Query: 241 ctcgacatgggaagggataaatcctcgaaaaccggttccaagattctgccagtaactgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ctcgacatgggaagggataaatcctcgaaaaccggttccaagattctgccagtaactgtt 549
Query: 301 gatgcgcatgggaatgttgcttatgatgccatagtgaagcagaatgagaatgctaagaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gatgcgcatgggaatgttgcttatgatgccatagtgaagcagaatgagaatgctaagaaa 609
Query: 361 attgtgtacacgcagcagaaggatttgataccgaagattttgaagaatgaagaagatgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 attgtgtacacgcagcagaaggatttgataccgaagattttgaagaatgaagaagatgat 669
Query: 421 gggatggatgaggatgaggatgtgcagaaagagattgaggaaaccatgcaggaaactaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gggatggatgaggatgaggatgtgcagaaagagattgaggaaaccatgcaggaaactaaa 729
Query: 481 gctgctcttgagaagatagttaatgtcagactcagtgcggcgcagccgaagaatgttgcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 gctgctcttgagaagatagttaatgtcagactcagtgcggcgcagccgaagaatgttgcc 789
Query: 541 aagcaatcatcggattcgaagtatattaagtacaagccttcgcagcag 588
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 aagcaatcatcggattcgaagtatattaagtacaagccttcgcagcag 837
>gnl|LJGI|TC69960 similar to UniRef100_Q3I4X9 Cluster: GAMYB-binding protein; n=1;
Glycine max|Rep: GAMYB-binding protein - Glycine max
(Soybean), partial (42%)
Length = 858
Score = 835 bits (421), Expect = 0.0
Identities = 690/779 (88%), Gaps = 3/779 (0%)
Strand = Plus / Plus
Query: 1 atggcagctttgaaagagcttctccctcaacccaaatcatcttccaccacttactacgac 60
||||| || ||||| |||||||| |||||||| |||||||||||| ||||||||||||||
Sbjct: 59 atggccgcgttgaatgagcttcttcctcaaccgaaatcatcttccgccacttactacgac 118
Query: 61 cacagcaacgatccatggttcaagcagaggttcacctcatcggaggaggaaaaggcctcc 120
|||||||| || |||||||||||||||||||||||||| || ||||| |||||||||||
Sbjct: 119 cacagcaatgacccatggttcaagcagaggttcacctcgtcagaggaagaaaaggcctct 178
Query: 121 gctgcgatcaagcagaagccggtgccgccatacctcaagcgcgccggcttcgttcctcgc 180
||||||||||||||||||| ||||||||||||||| ||||||||||| || ||||| ||
Sbjct: 179 gctgcgatcaagcagaagcaggtgccgccatacctgaagcgcgccggttttgttccccga 238
Query: 181 agagtcgaggatttcggggacggcggagccttccccgaaatccacgtcgcacagtatcct 240
|| || |||||||||||||| |||||||| ||||| || || || || |||||||| |||
Sbjct: 239 agggttgaggatttcggggatggcggagcattccctgagattcatgtggcacagtaccct 298
Query: 241 ctcgacatgggaagggataaatcctcgaaaaccggttccaagattctgccagtaactgtt 300
|| |||||||||||||| || || || ||| |||||||||||||||| || || || ||
Sbjct: 299 cttgacatgggaagggacaagtcatcaaaacccggttccaagattcttcctgtgaccgtc 358
Query: 301 gatgcgcatgggaatgttgcttatgatgccatagtgaagcagaatgagaatgctaagaaa 360
|| || || ||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 359 gacgctcacgggaatgttgcctatgatgccatagtgaagcagaatgagaacgctaagaaa 418
Query: 361 attgtgtacacgcagcagaaggatttgataccgaagattttgaagaatgaagaagatgat 420
|| ||||||||||||||||||||| | ||||||||||| |||||||| |||||||| ||
Sbjct: 419 atcgtgtacacgcagcagaaggatctaataccgaagatattgaagaacgaagaagaatat 478
Query: 421 ggg---atggatgaggatgaggatgtgcagaaagagattgaggaaaccatgcaggaaact 477
|| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 479 ggtgacatggatgaggatgaggatgtgcagaaagagattgatgaaaccatgcaggaaact 538
Query: 478 aaagctgctcttgagaagatagttaatgtcagactcagtgcggcgcagccgaagaatgtt 537
||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||
Sbjct: 539 aaagctgctcttgagaagatagttaatgtgagactcagtgcggcgcagcctaaaaatgtt 598
Query: 538 gccaagcaatcatcggattcgaagtatattaagtacaagccttcgcagcagagtgcggca 597
|||||||||| || ||| | |||||||| |||||||||||||| ||||| || || ||
Sbjct: 599 cccaagcaatcctctgatgctaagtatatcaagtacaagccttcacagcaaagcgcagct 658
Query: 598 ttcaattccggggcgaaggagagggtgattaggatggttgagatgccggtggatccactt 657
|||||| | ||||| ||||||||||||||||||||| | |||||||| |||||||| ||
Sbjct: 659 ttcaatacgggggcaaaggagagggtgattaggatgatggagatgcccgtggatccgctc 718
Query: 658 gagcctccgaagttcaagcataagcgtgttcctaaggcttctggttcgcctccggtgccg 717
|||||||| ||||| ||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 719 gagcctccaaagtttaagcataagcgtgttcctaaggcttctggctcccctccggtgcca 778
Query: 718 gttatgcattcgccgcctaggcctgttactgtgaaggatcaacaagattggaagatacc 776
|| |||||||| || | ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 779 gtgatgcattcaccttcgaggcctgttactgtgaaggatcagcaagattggaagatacc 837