Miyakogusa Predicted Gene
- Lj3g3v3523880.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3523880.1 tr|I3SVH6|I3SVH6_LOTJA ATP-dependent Clp protease
proteolytic subunit OS=Lotus japonicus GN=clpP
PE=,99.38,0,CLP_protease,ClpP/TepA; ATP-DEPENDENT CLP PROTEASE
PROTEOLYTIC SUBUNIT,ClpP/TepA; seg,NULL; CLP_PROT,gene.g50976.t1.1
(486 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60180 homologue to UniRef100_A5AL82 Cluster: ATP-depe... 950 0.0
gnl|LJGI|BP044487 similar to UniRef100_A5AL82 Cluster: ATP-depen... 319 9e-87
>gnl|LJGI|TC60180 homologue to UniRef100_A5AL82 Cluster: ATP-dependent Clp protease
proteolytic subunit; n=1; Vitis vinifera|Rep:
ATP-dependent Clp protease proteolytic subunit - Vitis
vinifera (Grape), partial (97%)
Length = 941
Score = 950 bits (479), Expect = 0.0
Identities = 482/483 (99%)
Strand = Plus / Plus
Query: 1 atggtgattgagcactcttcccgaggcgaacgagcctacgacatcttctctcgccttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 atggtgattgagcactcttcccgaggcgaacgagcctacgacatcttctctcgccttctc 217
Query: 61 aaggagcgcatcatctgcatcaacggacccatctccgacgacaccgctcatgtcgtcgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 aaggagcgcatcatctgcatcaacggacccatctccgacgacaccgctcatgtcgtcgtc 277
Query: 121 gctcagctcctcttcctcgaatccgaaaacccttccaaacctatcaacatgtatctcaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gctcagctcctcttcctcgaatccgaaaacccttccaaacctatcaacatgtatctcaat 337
Query: 181 tctcctggtggcgccgtcactgcagggcttgcaatttatgatactatgcagtacattcgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tctcctggtggcgccgtcactgcagggcttgcaatttatgatactatgcagtacattcgg 397
Query: 241 tctccaatcaatacgatctgtttaggccaagctgcgtccatgggttctctcctattggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tctccaatcaatacgatctgtttaggccaagctgcgtccatgggttctctcctattggct 457
Query: 301 gcgggtgccaagggtcagaggcgttcccttcccaatgcttctatcatgattcaccagccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gcgggtgccaagggtcagaggcgttcccttcccaatgcttctatcatgattcaccagccc 517
Query: 361 tctgggggttatagtggccaggcaaaggatatcgccattcatactaagcagattgttcgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tctgggggttatagtggccaggcaaaggatatcgccattcatactaagcagattgttcgg 577
Query: 421 gtttgggatttgctgaatgttttgtacgccaagcacacgggccagtcgattgagctgatt 480
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gtttgggatttgctgaatgatttgtacgccaagcacacgggccagtcgattgagctgatt 637
Query: 481 cag 483
|||
Sbjct: 638 cag 640
>gnl|LJGI|BP044487 similar to UniRef100_A5AL82 Cluster: ATP-dependent Clp protease
proteolytic subunit; n=1; Vitis vinifera|Rep:
ATP-dependent Clp protease proteolytic subunit - Vitis
vinifera (Grape), partial (46%)
Length = 533
Score = 319 bits (161), Expect = 9e-87
Identities = 164/165 (99%)
Strand = Plus / Minus
Query: 319 aggcgttcccttcccaatgcttctatcatgattcaccagccctctgggggttatagtggc 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 aggcgttcccttcccaatgcttctatcatgattcaccagccctctgggggttatagtggc 474
Query: 379 caggcaaaggatatcgccattcatactaagcagattgttcgggtttgggatttgctgaat 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 caggcaaaggatatcgccattcatactaagcagattgttcgggtttgggatttgctgaat 414
Query: 439 gttttgtacgccaagcacacgggccagtcgattgagctgattcag 483
| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gatttgtacgccaagcacacgggccagtcgattgagctgattcag 369