Miyakogusa Predicted Gene
- Lj3g3v3523820.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3523820.1 Non Chatacterized Hit- tr|B9FR06|B9FR06_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,92.31,0.000000000005,no description,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL; Oligoxyloglucan
redu,gene.g50972.t1.1
(1218 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61733 homologue to UniRef100_A7P2W0 Cluster: Chromoso... 809 0.0
gnl|LJGI|TC68074 homologue to UniRef100_A7P2W0 Cluster: Chromoso... 652 0.0
gnl|LJGI|TC71261 similar to UniRef100_A5JVZ6 Cluster: Plastid hi... 377 e-103
>gnl|LJGI|TC61733 homologue to UniRef100_A7P2W0 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 800
Score = 809 bits (408), Expect = 0.0
Identities = 408/408 (100%)
Strand = Plus / Plus
Query: 373 ggttttcttctgggtacgaggcaaacccttttggagactaaagatggaggaaacacttgg 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ggttttcttctgggtacgaggcaaacccttttggagactaaagatggaggaaacacttgg 452
Query: 433 ggtccacgatctataccctctgcagaggatgaagatttcaactacaggtttaattccatc 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ggtccacgatctataccctctgcagaggatgaagatttcaactacaggtttaattccatc 512
Query: 493 agcttcagagggaaggaagggtggatagtggggaaacctaatattctgctctacacttct 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 agcttcagagggaaggaagggtggatagtggggaaacctaatattctgctctacacttct 572
Query: 553 gatgctggagaaagttggggaaggataccactcagtgctcaacttcctggtgatatggtg 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gatgctggagaaagttggggaaggataccactcagtgctcaacttcctggtgatatggtg 632
Query: 613 tacataaaggcaactggggataagagtgcagagatggtgactgacgaaggtgcaatctat 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tacataaaggcaactggggataagagtgcagagatggtgactgacgaaggtgcaatctat 692
Query: 673 gttacatcaaatagaggctacaactggaaggctgctgttcaggaaacggtgtcagctact 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 gttacatcaaatagaggctacaactggaaggctgctgttcaggaaacggtgtcagctact 752
Query: 733 ctcaacagaacagtttctagtggcattagcggtgcaagctattacact 780
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ctcaacagaacagtttctagtggcattagcggtgcaagctattacact 800
Score = 595 bits (300), Expect = e-169
Identities = 300/300 (100%)
Strand = Plus / Plus
Query: 1 atggcgactctgcaattcaccttcactgacccaaccacgttatggaggccatctctccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 atggcgactctgcaattcaccttcactgacccaaccacgttatggaggccatctctccct 155
Query: 61 tcttcttctagaacttcccattctcgcaaccgcaccagcttcgtcgtcaaagcttctttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 tcttcttctagaacttcccattctcgcaaccgcaccagcttcgtcgtcaaagcttctttc 215
Query: 121 gacatttccagaaccaggagacagctcctcgccgacaccgcagcattatctctgctactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gacatttccagaaccaggagacagctcctcgccgacaccgcagcattatctctgctactc 275
Query: 181 ccttctctgccggcgaggtccgacgaggcgctcgctgagtgggagagagtttacctccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ccttctctgccggcgaggtccgacgaggcgctcgctgagtgggagagagtttacctccct 335
Query: 241 atcgaccctggcgtcgtgcttctcgacattgctttcgtccctgaggatcccaaccatggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 atcgaccctggcgtcgtgcttctcgacattgctttcgtccctgaggatcccaaccatggt 395
>gnl|LJGI|TC68074 homologue to UniRef100_A7P2W0 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (36%)
Length = 762
Score = 652 bits (329), Expect = 0.0
Identities = 376/397 (94%), Gaps = 21/397 (5%)
Strand = Plus / Plus
Query: 814 ggaaattatgtcgctgtatcaagtcgtggtaacttctacttaacctgggagcctggtcag 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaaattatgtcgctgtatcaagtcgtggtaacttctacttaacctgggagcctggtcag 60
Query: 874 gaaaatattcacatcatccttgcatactggcagccacataacagagcagttgccagaaga 933
| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 g---------------------catactggcagccacataacagagcagttgccagaaga 99
Query: 934 attcagaacatgggatggagagctgatggtggtctgtggcttcttgttcgcggaggtggt 993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 attcagaacatgggatggagagctgatggtggtctgtggcttcttgttcgcggaggtggt 159
Query: 994 ctttatctaagcaaaggcacagggataactgaagaatttgaggaggtgcctgttcaaagc 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 ctttatctaagcaaaggcacagggataactgaagaatttgaggaggtgcctgttcaaagc 219
Query: 1054 cggggctttggcattcttgatgtggggtatcgttcaacggacgaggcttgggcagcagga 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 cggggctttggcattcttgatgtggggtatcgttcaacggacgaggcttgggcagcagga 279
Query: 1114 ggaagtggtgttctgttgagaactaataatggtggcaagtcatgggttcgtgacaaagct 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ggaagtggtgttctgttgagaactaataatggtggcaagtcatgggttcgtgacaaagct 339
Query: 1174 gctgacaacattgctgcaaatttatactctgtgaagt 1210
|||||||||||||||||||||||||||||||||||||
Sbjct: 340 gctgacaacattgctgcaaatttatactctgtgaagt 376
>gnl|LJGI|TC71261 similar to UniRef100_A5JVZ6 Cluster: Plastid high chlorophyll
fluorescence 136 precursor; n=1; Zea mays|Rep: Plastid
high chlorophyll fluorescence 136 precursor - Zea mays
(Maize), partial (22%)
Length = 730
Score = 377 bits (190), Expect = e-103
Identities = 193/194 (99%)
Strand = Plus / Plus
Query: 1017 gataactgaagaatttgaggaggtgcctgttcaaagccggggctttggcattcttgatgt 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 gataactgaagaatttgaggaggtgcctgttcaaagccggggctttggcattcttgatgt 247
Query: 1077 ggggtatcgttcaacggacgaggcttgggcagcaggaggaagtggtgttctgttgagaac 1136
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggggtatcgttcaacggacggggcttgggcagcaggaggaagtggtgttctgttgagaac 307
Query: 1137 taataatggtggcaagtcatgggttcgtgacaaagctgctgacaacattgctgcaaattt 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 taataatggtggcaagtcatgggttcgtgacaaagctgctgacaacattgctgcaaattt 367
Query: 1197 atactctgtgaagt 1210
||||||||||||||
Sbjct: 368 atactctgtgaagt 381