Miyakogusa Predicted Gene
- Lj3g3v3500160.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3500160.1 tr|G7KWV0|G7KWV0_MEDTR Endo-1,4-beta-xylanase C
OS=Medicago truncatula GN=MTR_7g024420 PE=3
SV=1,73.04,0,(Trans)glycosidases,Glycoside hydrolase, superfamily;
Glyco_hydro_10,Glycoside hydrolase, family 10;,CUFF.45867.1
(1230 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV770592 similar to UniRef100_Q8GTJ2 Cluster: Endoxylan... 779 0.0
gnl|LJGI|BP058305 weakly similar to UniRef100_UPI000034F169 Clus... 242 4e-63
>gnl|LJGI|AV770592 similar to UniRef100_Q8GTJ2 Cluster: Endoxylanase precursor; n=1;
Carica papaya|Rep: Endoxylanase precursor - Carica
papaya (Papaya), partial (20%)
Length = 489
Score = 779 bits (393), Expect = 0.0
Identities = 403/405 (99%), Gaps = 1/405 (0%)
Strand = Plus / Plus
Query: 1 atgcttaagggtggtctcacag-caaatacatcaggaactgctgagctttattttgagag 59
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 85 atgcttaagggtggtctcacagacaaatacatcaggaactgctgagctttattttgagag 144
Query: 60 cgaaaacacttcagtggaaatttggattgatagcatttccttgcaacctttcacacaaaa 119
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 145 cgaaaacacttcagtggaaatttggatcgatagcatttccttgcaacctttcacacaaaa 204
Query: 120 gcaatggagttctcatcaacatcaaagcactgagaaggctcgcaagagcaaggtattagt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gcaatggagttctcatcaacatcaaagcactgagaaggctcgcaagagcaaggtattagt 264
Query: 180 ccaagcaattgatgaacaaggaaatcctttaccaaatgcaagcatacacattacacaaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccaagcaattgatgaacaaggaaatcctttaccaaatgcaagcatacacattacacaaaa 324
Query: 240 gaggttaggttttccatttgggagtgccattaaccacaacatcctgaacaatggggcata 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaggttaggttttccatttgggagtgccattaaccacaacatcctgaacaatggggcata 384
Query: 300 tcaaaattggttcacctcaaggttcacagtgaccacatttgagaatgaaatgaagtggta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcaaaattggttcacctcaaggttcacagtgaccacatttgagaatgaaatgaagtggta 444
Query: 360 catgacagaaacaacacaaggcaagcctaactactattatgctga 404
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 catgacagaaacaacacaaggcaagcctaactactattatgctga 489
>gnl|LJGI|BP058305 weakly similar to UniRef100_UPI000034F169 Cluster: glycosyl hydrolase
family 10 protein; n=1; Arabidopsis thaliana|Rep:
glycosyl hydrolase family 10 protein - Arabidopsis
thaliana, partial (5%)
Length = 288
Score = 242 bits (122), Expect = 4e-63
Identities = 126/128 (98%)
Strand = Plus / Minus
Query: 1103 agcttcttcatgagtggggttggtcgaaaacgttatcagggacaacagaccagaatggga 1162
|||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 288 agcttcttcatgagtgggnttgntcgaaaacgttatcagggacaacagaccagaatggga 229
Query: 1163 accttgaggtgtcactttttcatggagattatgaagtggaaattagtcaccctgctaaga 1222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 accttgaggtgtcactttttcatggagattatgaagtggaaattagtcaccctgctaaga 169
Query: 1223 agaattat 1230
||||||||
Sbjct: 168 agaattat 161