Miyakogusa Predicted Gene

Lj3g3v3500140.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3500140.1 Non Chatacterized Hit- tr|B9JTD3|B9JTD3_AGRVS
Putative uncharacterized protein OS=Agrobacterium
viti,46.15,6.6,seg,NULL,CUFF.45865.1
         (352 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75977 similar to UniRef100_A7P874 Cluster: Chromosome...   283   4e-76

>gnl|LJGI|TC75977 similar to UniRef100_A7P874 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 536

 Score =  283 bits (143), Expect = 4e-76
 Identities = 143/143 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtggtgaccgatccaaccggaattccggcggcgaggattccagttcgagatggggtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 atggtggtgaccgatccaaccggaattccggcggcgaggattccagttcgagatggggtt 453

                                                                       
Query: 61  cgtctagggtttctgatgagagccggaggaacggtggttcgtttagggattcgaatcgcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgtctagggtttctgatgagagccggaggaacggtggttcgtttagggattcgaatcgcg 513

                                  
Query: 121 agattgagccgtcgcgtgctgat 143
           |||||||||||||||||||||||
Sbjct: 514 agattgagccgtcgcgtgctgat 536