Miyakogusa Predicted Gene

Lj3g3v3464480.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3464480.1 Non Chatacterized Hit- tr|I1KUW4|I1KUW4_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,95.39,0,PP2APR55,Protein phosphatase 2A, regulatory subunit PR55;
PROTEIN PHOSPHATASE PP2A 55 KDA REGULATORY,CUFF.45839.1
         (459 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63026 homologue to UniRef100_Q9FVD4 Cluster: Ser/Thr ...   910   0.0  
gnl|LJGI|TC62866 homologue to UniRef100_Q9FVD4 Cluster: Ser/Thr ...   295   1e-79

>gnl|LJGI|TC63026 homologue to UniRef100_Q9FVD4 Cluster: Ser/Thr specific protein
           phosphatase 2A B regulatory subunit beta isoform; n=1;
           Medicago sativa subsp. x varia|Rep: Ser/Thr specific
           protein phosphatase 2A B regulatory subunit beta isoform
           - Medicago varia (Alfalfa), partial (57%)
          Length = 1488

 Score =  910 bits (459), Expect = 0.0
 Identities = 459/459 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgactctaaagttatgggacatcaacatggattcaggcccagttgcaacgttccaggtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 atgactctaaagttatgggacatcaacatggattcaggcccagttgcaacgttccaggtt 511

                                                                       
Query: 61  catgagtatttaaggccaaagctttgtgatttatatgaaaacgattcaatttttgacaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 catgagtatttaaggccaaagctttgtgatttatatgaaaacgattcaatttttgacaag 571

                                                                       
Query: 121 tttgagtgttgtctgagtggtgatggatcacgtgtttcaactggttcttacagcaatcta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tttgagtgttgtctgagtggtgatggatcacgtgtttcaactggttcttacagcaatcta 631

                                                                       
Query: 181 ttccgtgtgtttggttgtgccccgggaagtactgaggctacgactttggaagccagtaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 ttccgtgtgtttggttgtgccccgggaagtactgaggctacgactttggaagccagtaaa 691

                                                                       
Query: 241 aatccaatgaggcgacaagttccaactccttcaaggcctgctagatcactggggaacagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 aatccaatgaggcgacaagttccaactccttcaaggcctgctagatcactggggaacagt 751

                                                                       
Query: 301 ataactagagttgtaagacgtggagctgaaagctctggtgttgatgcaaatgggaattct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 ataactagagttgtaagacgtggagctgaaagctctggtgttgatgcaaatgggaattct 811

                                                                       
Query: 361 tttgatttcacgacaaagttgctgcacttggcgtggcacccaactgaaaattcaattgct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 tttgatttcacgacaaagttgctgcacttggcgtggcacccaactgaaaattcaattgct 871

                                                  
Query: 421 tgcgctgctgcgaatagcttatacatgtactatgcttga 459
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 872 tgcgctgctgcgaatagcttatacatgtactatgcttga 910


>gnl|LJGI|TC62866 homologue to UniRef100_Q9FVD4 Cluster: Ser/Thr specific protein
           phosphatase 2A B regulatory subunit beta isoform; n=1;
           Medicago sativa subsp. x varia|Rep: Ser/Thr specific
           protein phosphatase 2A B regulatory subunit beta isoform
           - Medicago varia (Alfalfa), partial (16%)
          Length = 864

 Score =  295 bits (149), Expect = 1e-79
 Identities = 218/241 (90%)
 Strand = Plus / Plus

                                                                       
Query: 212 ctgaggctacgactttggaagccagtaaaaatccaatgaggcgacaagttccaactcctt 271
           |||||||||| ||||| ||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 4   ctgaggctacaactttagaagccagtaaaaatccaatgagacgacaagttccaacccctt 63

                                                                       
Query: 272 caaggcctgctagatcactggggaacagtataactagagttgtaagacgtggagctgaaa 331
           |||||||| ||||||||||||| || || |||||  || ||| |||||| ||||| ||||
Sbjct: 64  caaggccttctagatcactgggaaatagcataacacgaattggaagacggggagcagaaa 123

                                                                       
Query: 332 gctctggtgttgatgcaaatgggaattcttttgatttcacgacaaagttgctgcacttgg 391
            | |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 124 cccctggggttgatgcaaatgggaattcttttgatttcacaacaaagttgctgcacttgg 183

                                                                       
Query: 392 cgtggcacccaactgaaaattcaattgcttgcgctgctgcgaatagcttatacatgtact 451
           | ||||| ||||||||||||||||||||||| |||||||| |||||||| ||||||||||
Sbjct: 184 catggcatccaactgaaaattcaattgcttgtgctgctgcaaatagcttgtacatgtact 243

            
Query: 452 a 452
           |
Sbjct: 244 a 244