Miyakogusa Predicted Gene
- Lj3g3v3430200.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3430200.1 tr|A9T3B0|A9T3B0_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,67.8,3e-18,PLAC8,Uncharacterised protein family Cys-rich;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; A_th,CUFF.45810.1
(723 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81409 similar to UniRef100_A7Q511 Cluster: Chromosome... 1409 0.0
gnl|LJGI|TC57597 similar to UniRef100_A7Q511 Cluster: Chromosome... 416 e-116
gnl|LJGI|TC82807 similar to UniRef100_A7Q511 Cluster: Chromosome... 353 1e-96
gnl|LJGI|GO025668 similar to UniRef100_A9S9T3 Cluster: Predicted... 228 4e-59
>gnl|LJGI|TC81409 similar to UniRef100_A7Q511 Cluster: Chromosome undetermined
scaffold_51, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_51, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (86%)
Length = 905
Score = 1409 bits (711), Expect = 0.0
Identities = 720/723 (99%)
Strand = Plus / Plus
Query: 1 atgatggaggaaaggactcaatcgcgctacgtcaaactcaccaaagatcagctccctgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 atgatggaggaaaggactcaatcgcgctacgtcaaactcaccaaagatcagctccctgtt 159
Query: 61 gaagatatcaaccctggtgaactcaatcagccaattgaggttccgcagttggctgttcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 gaagatatcaaccctggtgaactcaatcagccaattgaggttccgcagttggctgttcac 219
Query: 121 aagtgcatggaatgtgggcagccattacccgaaagctatgcacctcctgctgatgaacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 aagtgcatggaatgtgggcagccattacccgaaagctatgcacctcctgctgatgaacct 279
Query: 181 tggatgactgggatctttggatgtgctgaagatagggaaaactgcttgacaggattattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tggatgactgggatctttggatgtgctgaagatagggaaaactgcttgacaggattattt 339
Query: 241 tgtccttgtgtattatttgggcgtaatgtggaaagcttgaatgaagatactccttggact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tgtccttgtgtattatttgggcgtaatgtggaaagcttgaatgaagatactccttggact 399
Query: 301 gggccatgtgtctgtcatgccatttttattgagggtggaattgctctggcaactgcaact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gggccatgtgtctgtcatgccatttttattgagggtggaattgctctggcaactgcaact 459
Query: 361 gcaatctttcatggtctcattgaccctgggacgtcatttctcatttttgagggtttattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gcaatctttcatggtctcattgaccctgggacgtcatttctcatttttgagggtttattt 519
Query: 421 tttacttggtggatgtgtggcatttacactggtcaggttcggcaatctttacagaagaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tttacttggtggatgtgtggcatttacactggtcaggttcggcaatctttacagaagaaa 579
Query: 481 tatcacttaaagaactcgccttgcgatccatgttgtgtacactgctgcatgcactggtgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 tatcacttaaagaactcgccttgcgatccatgttgtgtacactgctgcatgcactggtgt 639
Query: 541 gccttgtgtcaagagcacagggagatgaagggacgtctctctgaaagtgttgtctcagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 gccttgtgtcaagagcacagggagatgaagggacgtctctctgaaagtgttgtctcagaa 699
Query: 601 atgacccttgtaaatgctcctcctgttcaagagatgaagtctactgatgacaaggaaagt 660
|||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 700 atgaccctagtaaatgctcctcctgttcaaaagatgaagtctactgatgacaaggaaagt 759
Query: 661 cctgaagcctcttctactaacaacaatcaccatactgatatggaaatgcaagctctatag 720
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 760 cctgaagcctcttctactaacaacaatcaccataatgatatggaaatgcaagctctatag 819
Query: 721 ata 723
|||
Sbjct: 820 ata 822
>gnl|LJGI|TC57597 similar to UniRef100_A7Q511 Cluster: Chromosome undetermined
scaffold_51, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_51, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (86%)
Length = 1230
Score = 416 bits (210), Expect = e-116
Identities = 543/654 (83%), Gaps = 15/654 (2%)
Strand = Plus / Plus
Query: 72 ccctggtgaactcaatcagccaattgaggttccgcagttggctgttcacaagtgcatgga 131
|||||||||||||||||| || || |||||||| ||||||||||||| ||||||| ||
Sbjct: 229 ccctggtgaactcaatcaacccatcgaggttcctcagttggctgttcgcaagtgccatga 288
Query: 132 atgtgggcagccattacccgaaagctatgcacctcctgctgatgaaccttggatgactgg 191
|||| | ||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 atgtagacagcctctacctgaaagctatgcacctcctgctgatgaaccttggatgactgg 348
Query: 192 gatctttggatgtgctgaagatagggaaaactgcttgacaggattattttgtccttgtgt 251
|||||||| ||||||||||| ||||||| |||||||||||| ||||||||||||||||
Sbjct: 349 gatctttgcttgtgctgaagacagggaaagttgcttgacaggactattttgtccttgtgt 408
Query: 252 attatttgggcgtaatgtggaaagcttgaatgaagatactccttggactgggccatgtgt 311
|||||||||||| ||| | || ||||||| ||||| ||||||||| |||||||| |
Sbjct: 409 attatttgggcgcaatttcgagagcttgagagaagacgttccttggaccgggccatgcat 468
Query: 312 ctgtcatgccatttttattgagggtggaattgctctggcaactgcaactgcaat-----c 366
||||||||||||||| |||| ||||| ||| |||| || | ||||||| | | |
Sbjct: 469 ttgtcatgccatttttgttgaaggtggcatttctcttgctatagcaactgtagttgcgac 528
Query: 367 tttcatggtctc----attgaccctgggacgtcatttctcatttttgagggtttattttt 422
|| | | | || |||||||| ||||| ||| |||||||| |||||||||||||||
Sbjct: 529 ttccgtcatttctggtattgacccagggacaacatgtctcatttatgagggtttattttt 588
Query: 423 tacttggtggatgtgtggcatttacactggtcaggttcggcaatctttacagaagaaata 482
||| |||||||||||||||||| | | |||||| ||||| ||| | | |||||||||||
Sbjct: 589 tacatggtggatgtgtggcattcataatggtcaagttcgacaaacactgcagaagaaata 648
Query: 483 tcacttaaagaactcgccttgcgatccatgttgtgtacactgctgcatgcactggtgtgc 542
|||||| ||||| || ||||| | |||| ||||| ||||||||| |||||||||||||
Sbjct: 649 tcacttgaagaattcaccttgtagtgcatgctgtgtgcactgctgcttgcactggtgtgc 708
Query: 543 cttgtgtcaagagcacagggagatgaagggacgtctctctgaaagtgttgtctcagaaat 602
||||||||| ||||||||||||||||||||| | ||||| || | |||| ||||||||||
Sbjct: 709 cttgtgtcaggagcacagggagatgaagggaaggctctcagacaatgttttctcagaaat 768
Query: 603 gacccttgtaaatgctcctcctgttcaagagatgaagtctac------tgatgacaagga 656
||| |||| || ||||||| ||||||||||||||||||| |||||| |||||
Sbjct: 769 gactgttgtgaaccctcctcccattcaagagatgaagtctactgataatgatgataagga 828
Query: 657 aagtcctgaagcctcttctactaacaacaatcaccatactgatatggaaatgca 710
|| ||||||| ||||||| ||||||||||| | || |||||| |||| |||||
Sbjct: 829 aaatcctgaaacctcttcagctaacaacaatgagcacactgatttggagatgca 882
>gnl|LJGI|TC82807 similar to UniRef100_A7Q511 Cluster: Chromosome undetermined
scaffold_51, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_51, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (78%)
Length = 1072
Score = 353 bits (178), Expect = 1e-96
Identities = 428/511 (83%), Gaps = 9/511 (1%)
Strand = Plus / Plus
Query: 72 ccctggtgaactcaatcagccaattgaggttccgcagttggctgttcacaagtgcatgga 131
|||||||||||||||||| || || |||||||| ||||||||||||| ||||||| ||
Sbjct: 151 ccctggtgaactcaatcaacccatcgaggttcctcagttggctgttcgcaagtgccatga 210
Query: 132 atgtgggcagccattacccgaaagctatgcacctcctgctgatgaaccttggatgactgg 191
|||| | ||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 atgtagacagcctctacctgaaagctatgcacctcctgctgatgaaccttggatgactgg 270
Query: 192 gatctttggatgtgctgaagatagggaaaactgcttgacaggattattttgtccttgtgt 251
|||||||| ||||||||||| ||||||| |||||||||||| ||||||||||||||||
Sbjct: 271 gatctttgcttgtgctgaagacagggaaagttgcttgacaggactattttgtccttgtgt 330
Query: 252 attatttgggcgtaatgtggaaagcttgaatgaagatactccttggactgggccatgtgt 311
|||||||||||| ||| | || ||||||| ||||| ||||||||| |||||||| |
Sbjct: 331 attatttgggcgcaatttcgagagcttgagagaagacgttccttggaccgggccatgcat 390
Query: 312 ctgtcatgccatttttattgagggtggaattgctctggcaactgcaactgcaat-----c 366
||||||||||||||| |||| ||||| ||| |||| || | ||||||| | | |
Sbjct: 391 ttgtcatgccatttttgttgaaggtggcatttctcttgctatagcaactgtagttgcgac 450
Query: 367 tttcatggtctc----attgaccctgggacgtcatttctcatttttgagggtttattttt 422
|| | | | || |||||||| ||||| ||| |||||||| |||||||||||||||
Sbjct: 451 ttccgtcatttctggtattgacccagggacaacatgtctcatttatgagggtttattttt 510
Query: 423 tacttggtggatgtgtggcatttacactggtcaggttcggcaatctttacagaagaaata 482
||| |||||||||||||||||| | | |||||| ||||| ||| | | |||||||||||
Sbjct: 511 tacatggtggatgtgtggcattcataatggtcaagttcgacaaacactgcagaagaaata 570
Query: 483 tcacttaaagaactcgccttgcgatccatgttgtgtacactgctgcatgcactggtgtgc 542
|||||| ||||| || ||||| | |||| || || ||||||||| |||||||||||||
Sbjct: 571 tcacttgaagaattcaccttgtagtgcatgctgcgtgcactgctgcttgcactggtgtgc 630
Query: 543 cttgtgtcaagagcacagggagatgaaggga 573
||||||||| |||||||||||||||||||||
Sbjct: 631 cttgtgtcaggagcacagggagatgaaggga 661
>gnl|LJGI|GO025668 similar to UniRef100_A9S9T3 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(48%)
Length = 716
Score = 228 bits (115), Expect = 4e-59
Identities = 282/338 (83%), Gaps = 6/338 (1%)
Strand = Plus / Plus
Query: 379 attgaccctgggacgtcatttctcatttttgagggtttattttttacttggtggatgtgt 438
|||||||| ||||| ||| |||||||| |||||||||||||||||| ||||||||||||
Sbjct: 153 attgacccagggacaacatgtctcatttatgagggtttattttttacatggtggatgtgt 212
Query: 439 ggcatttacactggtcaggttcggcaatctttacagaagaaatatcacttaaagaactcg 498
|||||| | | |||||| |||| ||| | | ||||||||||||||||| ||||| ||
Sbjct: 213 ggcattcataatggtcaaattcgacaaacactgcagaagaaatatcacttgaagaattca 272
Query: 499 ccttgcgatccatgttgtgtacactgctgcatgcactggtgtgccttgtgtcaagagcac 558
||||| | |||| ||||| ||||||||| |||||||||||||||||||||| ||||||
Sbjct: 273 ccttgtagtgcatgctgtgtgcactgctgcttgcactggtgtgccttgtgtcaggagcac 332
Query: 559 agggagatgaagggacgtctctctgaaagtgttgtctcagaaatgacccttgtaaatgct 618
||||||||||||||| | ||||| || | |||| ||||||||||||| |||| || ||
Sbjct: 333 agggagatgaagggaaggctctcagacaatgttttctcagaaatgactgttgtgaaccct 392
Query: 619 cctcctgttcaagagatgaagtctac------tgatgacaaggaaagtcctgaagcctct 672
||||| ||||||||||||||||||| |||||| ||||||| ||||||| |||||
Sbjct: 393 cctcccattcaagagatgaagtctactgataatgatgataaggaaaatcctgaaacctct 452
Query: 673 tctactaacaacaatcaccatactgatatggaaatgca 710
|| ||||||||||| | || |||||| |||| |||||
Sbjct: 453 tcagctaacaacaatgagcacactgatttggagatgca 490