Miyakogusa Predicted Gene
- Lj3g3v3409070.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3409070.1 tr|B7G7I3|B7G7I3_PHATC Predicted protein
OS=Phaeodactylum tricornutum (strain CCAP 1055/1)
GN=PHATRD,33.93,8e-18,NicO,Nickel/cobalt transporter, high-affinity;
seg,NULL,CUFF.45799.1
(1104 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75026 similar to UniRef100_A7P8C2 Cluster: Chromosome... 1291 0.0
gnl|LJGI|TC59175 similar to UniRef100_A7P8C2 Cluster: Chromosome... 783 0.0
gnl|LJGI|TC66549 similar to UniRef100_A7P8C2 Cluster: Chromosome... 394 e-109
gnl|LJGI|TC82323 UniRef100_A7P8C2 Cluster: Chromosome chr3 scaff... 135 6e-31
>gnl|LJGI|TC75026 similar to UniRef100_A7P8C2 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 840
Score = 1291 bits (651), Expect = 0.0
Identities = 651/651 (100%)
Strand = Plus / Plus
Query: 1 atggataggcttctactacaatccccttctctcaacaccgctattcgccgcaaacccttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 atggataggcttctactacaatccccttctctcaacaccgctattcgccgcaaacccttc 249
Query: 61 actccgaccaccactcgttctcattccaccgctagattcaaatcatcttcttcccctttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 actccgaccaccactcgttctcattccaccgctagattcaaatcatcttcttcccctttc 309
Query: 121 agtttcaggatgatttgcaagcatcaaaacccatctccattttcctcttccaccactccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 agtttcaggatgatttgcaagcatcaaaacccatctccattttcctcttccaccactccc 369
Query: 181 tgcttcgcctcatcggttccactcgaagattcttctgatgcccacatacccaaatcccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tgcttcgcctcatcggttccactcgaagattcttctgatgcccacatacccaaatcccaa 429
Query: 241 cccctcaatcagatcactgatggggactcgaaaaacccaaaggcaataacagctcggaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 cccctcaatcagatcactgatggggactcgaaaaacccaaaggcaataacagctcggaca 489
Query: 301 tttgtattactctctgctcttgttatgcttttaattcaaccagcttttgcaccagcagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tttgtattactctctgctcttgttatgcttttaattcaaccagcttttgcaccagcagct 549
Query: 361 tttgcaaccttccaaaatgcggccaagaccggtggtcctgcactaatccgcaatgagctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tttgcaaccttccaaaatgcggccaagaccggtggtcctgcactaatccgcaatgagctt 609
Query: 421 gtaagtagtgcttggactggtttctttgctggttgcttgcacacgctatcggggcctgac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gtaagtagtgcttggactggtttctttgctggttgcttgcacacgctatcggggcctgac 669
Query: 481 caccttgcagctttggctccattgtcaattggccgtacccggatggagagtgctgctgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 caccttgcagctttggctccattgtcaattggccgtacccggatggagagtgctgctgtt 729
Query: 541 ggagccctttggggttgcggccatgatgctggacaggttatctttggcttaatatttttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ggagccctttggggttgcggccatgatgctggacaggttatctttggcttaatatttttg 789
Query: 601 ctcctgaaagatcgacttcacattgaaattattcaaacttggggcactcga 651
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 ctcctgaaagatcgacttcacattgaaattattcaaacttggggcactcga 840
>gnl|LJGI|TC59175 similar to UniRef100_A7P8C2 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (92%)
Length = 1444
Score = 783 bits (395), Expect = 0.0
Identities = 724/835 (86%), Gaps = 9/835 (1%)
Strand = Plus / Plus
Query: 272 aaaacccaaaggcaataacagctcggacatttgtattactctctgctcttgttatgcttt 331
|||| ||||||||| |||||||||||||| ||||| |||||||||||||||| | | | |
Sbjct: 355 aaaaaccaaaggcactaacagctcggacacttgtaatactctctgctcttgtcacgatct 414
Query: 332 taattcaaccagcttttgcaccagcagcttttgcaaccttccaaaatgcggccaagaccg 391
|||| ||||||||| |||| ||||||||||||||||| || |||| ||| ||||| |||
Sbjct: 415 taatccaaccagctattgccccagcagcttttgcaacatttcaaactgctgccaatgccg 474
Query: 392 gtggtcctgc---------actaatccgcaatgagcttgtaagtagtgcttggactggtt 442
| ||| | | ||||||||||| |||||| |||| |||||||||||||| |
Sbjct: 475 gaggtgcagttggtggaaaactaatccgcactgagctcctaagcagtgcttggactggct 534
Query: 443 tctttgctggttgcttgcacacgctatcggggcctgaccaccttgcagctttggctccat 502
|||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||
Sbjct: 535 tctttgctggttgcttgcacaccttatcagggcctgaccaccttgccgctttggctccat 594
Query: 503 tgtcaattggccgtacccggatggagagtgctgctgttggagccctttggggttgcggcc 562
| |||||||| || ||||| ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 595 tatcaattggtcgcacccgaatggagagtgctgctgtgggagccctttggggttgtggcc 654
Query: 563 atgatgctggacaggttatctttggcttaatatttttgctcctgaaagatcgacttcaca 622
|||||||||| ||||| || ||||||||||||||||| ||||||| |||||||||||||
Sbjct: 655 atgatgctggtcaggtcatatttggcttaatatttttaatcctgaaggatcgacttcaca 714
Query: 623 ttgaaattattcaaacttggggcactcgagtggtggggcttaccttgctagttatcggtg 682
|||||||||||| ||||||||||||| |||||||||| ||||| ||||||| || ||||
Sbjct: 715 ttgaaattattcgaacttggggcactagagtggtgggctttaccctgctagtaattggtg 774
Query: 683 ctatgggaattaaagaagcttcagaagtacctaccccatgcgttgccttggaaaatggcg 742
|||||||||||| |||||||||||||| || | || | |||||||| |||||||| |
Sbjct: 775 ctatgggaattagagaagcttcagaagcggctgcaccctctgttgccttagaaaatggtg 834
Query: 743 aatgcgatgtcggcgtctatgagtcacttgataatcctgcagtaggaaagaagaagattg 802
|| | ||||| ||||||||| |||||||||||||| | | |||||||||||||||
Sbjct: 835 aaggtgatgtaaacgtctatgaatcacttgataatccaaaaacacgaaagaagaagattg 894
Query: 803 gttttgctacttttgcgactggaatagttcatggactgcaaccagacgcgttgatgatgg 862
|||||||||||||||| || || ||||||||||| |||||||||| || ||||||||||
Sbjct: 895 gttttgctacttttgccaccgggatagttcatggtttgcaaccagatgcattgatgatgg 954
Query: 863 tgttgcctgctcttgctttgccttctcgcgtgtctggtgctgcatttctcatcatgttct 922
|||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 955 tgttgcctgcccttgctttgccttctcgtttggctggtgctgcatttctcatcatgttct 1014
Query: 923 tactaggaactgtagttgcaatggggagctatacagtatttataggatcatgtagcgagg 982
|| | ||||||||| |||||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 1015 tatttggaactgtaattgcaatgggaagctatacagtattcatagggtcatgtagcgagg 1074
Query: 983 cactaaaggatagaatacctagaatcactgagaaactcacttgggcttcttctcttattg 1042
| || ||||||| | ||||||| || |||||||||||||||||||| |||||||||||||
Sbjct: 1075 cccttaaggataaagtacctaggataactgagaaactcacttgggcatcttctcttattg 1134
Query: 1043 caatagcccttggatttgccatccttatcagccagtttttcgggtttagcctgta 1097
| ||||||||||||||||| ||| |||| ||||||||||| |||||||| |||||
Sbjct: 1135 ctatagcccttggatttgcgatcattattagccagttttttgggtttagtctgta 1189
>gnl|LJGI|TC66549 similar to UniRef100_A7P8C2 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 824
Score = 394 bits (199), Expect = e-109
Identities = 369/427 (86%), Gaps = 9/427 (2%)
Strand = Plus / Plus
Query: 272 aaaacccaaaggcaataacagctcggacatttgtattactctctgctcttgttatgcttt 331
|||| ||||||||| |||||||||||||| ||||| |||||||||||||||| | | | |
Sbjct: 395 aaaaaccaaaggcactaacagctcggacacttgtaatactctctgctcttgtcacgatct 454
Query: 332 taattcaaccagcttttgcaccagcagcttttgcaaccttccaaaatgcggccaagaccg 391
|||| ||||||||| |||| ||||||||||||||||| || |||| ||| ||||| |||
Sbjct: 455 taatccaaccagctattgccccagcagcttttgcaacatttcaaactgctgccaatgccg 514
Query: 392 gtggtcctgc---------actaatccgcaatgagcttgtaagtagtgcttggactggtt 442
| ||| | | ||||||||||| |||||| |||| |||||||||||||| |
Sbjct: 515 gaggtgcagttggtggaaaactaatccgcactgagctcctaagcagtgcttggactggct 574
Query: 443 tctttgctggttgcttgcacacgctatcggggcctgaccaccttgcagctttggctccat 502
|||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||
Sbjct: 575 tctttgctggttgcttgcacaccttatcagggcctgaccaccttgccgctttggctccat 634
Query: 503 tgtcaattggccgtacccggatggagagtgctgctgttggagccctttggggttgcggcc 562
| |||||||| || ||||| ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 635 tatcaattggtcgcacccgaatggagagtgctgctgtgggagccctttggggttgtggcc 694
Query: 563 atgatgctggacaggttatctttggcttaatatttttgctcctgaaagatcgacttcaca 622
|||||||||| ||||| || ||||||||||||||||| ||||||| |||||||||||||
Sbjct: 695 atgatgctggtcaggtcatatttggcttaatatttttaatcctgaaggatcgacttcaca 754
Query: 623 ttgaaattattcaaacttggggcactcgagtggtggggcttaccttgctagttatcggtg 682
|||||||||||| ||||||||||||| |||||||||| ||||| ||||||| || ||||
Sbjct: 755 ttgaaattattcgaacttggggcactagagtggtgggctttaccctgctagtaattggtg 814
Query: 683 ctatggg 689
|||||||
Sbjct: 815 ctatggg 821
>gnl|LJGI|TC82323 UniRef100_A7P8C2 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_8, whole genome shotgun sequence - Vitis
vinifera (Grape), partial (7%)
Length = 321
Score = 135 bits (68), Expect = 6e-31
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 1031 cttctcttattgcaatagcccttggatttgccatccttatcagccagtttttcgggttta 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttctcttattgcaatagcccttggatttgccatccttatcagccagtttttcgggttta 60
Query: 1091 gcctgtac 1098
||||||||
Sbjct: 61 gcctgtac 68