Miyakogusa Predicted Gene
- Lj3g3v3386580.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3386580.1 Non Chatacterized Hit- tr|J3LZZ4|J3LZZ4_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G2,33.09,0.0007,GATA_ZN_FINGER_2,Zinc finger, GATA-type;
seg,NULL; GATA_ZN_FINGER_1,Zinc finger, GATA-type; zinc
fin,CUFF.45766.1
(915 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77034 similar to UniRef100_A7P7X0 Cluster: Chromosome... 1400 0.0
gnl|LJGI|TC69889 similar to UniRef100_A7QE32 Cluster: Chromosome... 133 2e-30
gnl|LJGI|TC71897 similar to UniRef100_A7P7X0 Cluster: Chromosome... 68 1e-10
gnl|LJGI|TC73303 similar to UniRef100_A7P7X0 Cluster: Chromosome... 60 3e-08
gnl|LJGI|BP048741 similar to UniRef100_A7QE32 Cluster: Chromosom... 58 1e-07
gnl|LJGI|TC69016 similar to UniRef100_A7PI38 Cluster: Chromosome... 58 1e-07
>gnl|LJGI|TC77034 similar to UniRef100_A7P7X0 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 1050
Score = 1400 bits (706), Expect = 0.0
Identities = 706/706 (100%)
Strand = Plus / Plus
Query: 210 tagcaccgtctcaggaggatcacaggaccgaatagaagaagatagcaattccaattccac 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 tagcaccgtctcaggaggatcacaggaccgaatagaagaagatagcaattccaattccac 186
Query: 270 cgccgccggtgactatgactccatttttgccggcgaattggcggttccggctgatgatgt 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 cgccgccggtgactatgactccatttttgccggcgaattggcggttccggctgatgatgt 246
Query: 330 ggcgggcctggagtgggtttctcactttgtcgacgattctctcccagagctttctcttct 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ggcgggcctggagtgggtttctcactttgtcgacgattctctcccagagctttctcttct 306
Query: 390 gtatcctgtccgggccgagcaaacacgggcccgggccgaaccggaagctagaccaggctc 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gtatcctgtccgggccgagcaaacacgggcccgggccgaaccggaagctagaccaggctc 366
Query: 450 agaccgagcccctttccctttccgcaccaagccgagaactaccaggactcgaaagcccat 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 agaccgagcccctttccctttccgcaccaagccgagaactaccaggactcgaaagcccat 426
Query: 510 tggtcacgtgtggtcgtttaaccccatggggttttcctcgatggcgccacctctctccgg 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tggtcacgtgtggtcgtttaaccccatggggttttcctcgatggcgccacctctctccgg 486
Query: 570 cgaggggttccgtcagccgccgatgaagaagcagaagaaaaagcccgaagcccaggacca 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 cgaggggttccgtcagccgccgatgaagaagcagaagaaaaagcccgaagcccaggacca 546
Query: 630 tacaggtgggcctcagtttcagcgaaggtgcagccactgccaagtgcagaaaacacccca 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tacaggtgggcctcagtttcagcgaaggtgcagccactgccaagtgcagaaaacacccca 606
Query: 690 gtggagggccggcccgctgggcccgaaaacactatgcaatgcttgcggcgtccggttcaa 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 gtggagggccggcccgctgggcccgaaaacactatgcaatgcttgcggcgtccggttcaa 666
Query: 750 gtccggtcggctttttccggagtatagaccggcctgtagcccaactttctctggtgaaat 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 gtccggtcggctttttccggagtatagaccggcctgtagcccaactttctctggtgaaat 726
Query: 810 tcactctaacagccatcgcaaagtgctggagatgaggagaaggaaggagacggctgaacc 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 tcactctaacagccatcgcaaagtgctggagatgaggagaaggaaggagacggctgaacc 786
Query: 870 ggtttccggtttggatcaggctcgaatggttcagagtttttgaagt 915
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 ggtttccggtttggatcaggctcgaatggttcagagtttttgaagt 832
Score = 180 bits (91), Expect = 1e-44
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 84 gtgcctgaacgcaaacaacgttgttgtcggtgaggatttttctgtcgatgatttgcttga 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgcctgaacgcaaacaacgttgttgtcggtgaggatttttctgtcgatgatttgcttga 60
Query: 144 cttttccaatggaaaagaaatggatgattat 174
|||||||||||||||||||||||||||||||
Sbjct: 61 cttttccaatggaaaagaaatggatgattat 91
>gnl|LJGI|TC69889 similar to UniRef100_A7QE32 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 552
Score = 133 bits (67), Expect = 2e-30
Identities = 169/203 (83%)
Strand = Plus / Plus
Query: 656 ggtgcagccactgccaagtgcagaaaacaccccagtggagggccggcccgctgggcccga 715
||||||| || ||||| |||||||| || || ||||||||| |||| ||||| ||| | |
Sbjct: 67 ggtgcagtcattgccaggtgcagaagacgccgcagtggaggaccggtccgctaggcgcca 126
Query: 716 aaacactatgcaatgcttgcggcgtccggttcaagtccggtcggctttttccggagtata 775
| || || ||||| || ||||| || || | ||||||||||||||||| | |||||||||
Sbjct: 127 agactctctgcaacgcgtgcggggttcgctacaagtccggtcggctttgttcggagtata 186
Query: 776 gaccggcctgtagcccaactttctctggtgaaattcactctaacagccatcgcaaagtgc 835
||||||| || ||||| || |||| |||||||||||||| |||||||| || ||||||
Sbjct: 187 gaccggcgtgcagccccaccttctgcggtgaaattcactccaacagccaccggaaagtgt 246
Query: 836 tggagatgaggagaaggaaggag 858
||||||| ||||| |||||||||
Sbjct: 247 tggagataaggaggaggaaggag 269
>gnl|LJGI|TC71897 similar to UniRef100_A7P7X0 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 570
Score = 67.9 bits (34), Expect = 1e-10
Identities = 99/121 (81%), Gaps = 6/121 (4%)
Strand = Plus / Plus
Query: 284 atgactccatttttgccggcgaattggcggttccggctgatgatgtggcgggcctggagt 343
|||| |||||||| ||| |||||| | |||||||||| |||| ||| | ||| ||||
Sbjct: 376 atgattccattttctccgccgaattaaccgttccggctggtgatttggatgacctagagt 435
Query: 344 gggtttctcactttgtcgacgattct------ctcccagagctttctcttctgtatcctg 397
||||||||||||| |||||||| ||| ||||| ||||||||||||||||||||||
Sbjct: 436 gggtttctcacttcgtcgacgactctctctccctccctgagctttctcttctgtatcctg 495
Query: 398 t 398
|
Sbjct: 496 t 496
>gnl|LJGI|TC73303 similar to UniRef100_A7P7X0 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 727
Score = 60.0 bits (30), Expect = 3e-08
Identities = 98/121 (80%), Gaps = 6/121 (4%)
Strand = Plus / Plus
Query: 284 atgactccatttttgccggcgaattggcggttccggctgatgatgtggcgggcctggagt 343
|||| |||||||| ||| |||||| | |||||||||| |||| ||| | ||| ||||
Sbjct: 365 atgattccattttctccgccgaattaaccgttccggctggtgatttggatgacctagagt 424
Query: 344 gggtttctcactttgtcgacgattct------ctcccagagctttctcttctgtatcctg 397
||||||||||||| |||||||| ||| ||||| || |||||||||||||||||||
Sbjct: 425 gggtttctcacttcgtcgacgactctctctccctccctgaactttctcttctgtatcctg 484
Query: 398 t 398
|
Sbjct: 485 t 485
>gnl|LJGI|BP048741 similar to UniRef100_A7QE32 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 558
Score = 58.0 bits (29), Expect = 1e-07
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 713 cgaaaacactatgcaatgcttgcggcgtccggttcaagtccggtcggct 761
||||||| || ||||||||||| || |||||||||||||| ||||||||
Sbjct: 401 cgaaaacgctctgcaatgcttgtggggtccggttcaagtcgggtcggct 353
>gnl|LJGI|TC69016 similar to UniRef100_A7PI38 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 1726
Score = 58.0 bits (29), Expect = 1e-07
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 688 cagtggagggccggcccgctgggcccgaaaacactatgcaatgcttgcggcgt 740
||||||||||| || || |||| ||||||||||| |||||||||||||||||
Sbjct: 1022 cagtggagggcagggccaatggggccgaaaacactctgcaatgcttgcggcgt 1074