Miyakogusa Predicted Gene
- Lj3g3v3376380.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3376380.3 Non Chatacterized Hit- tr|I0YVV1|I0YVV1_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,30,2e-18,MatE,Multi antimicrobial extrusion protein; matE: MATE
efflux family protein,Multi antimicrobial ext,CUFF.45926.3
(1758 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71999 similar to UniRef100_Q8LDE3 Cluster: Enhanced d... 1515 0.0
gnl|LJGI|TC68853 similar to UniRef100_A7P7W6 Cluster: Chromosome... 912 0.0
gnl|LJGI|TC82338 similar to UniRef100_Q8LDE3 Cluster: Enhanced d... 888 0.0
gnl|LJGI|TC59031 similar to UniRef100_Q945F0 Cluster: Enhanced d... 272 7e-72
gnl|LJGI|TC60934 similar to UniRef100_A7P7W5 Cluster: Chromosome... 170 2e-41
>gnl|LJGI|TC71999 similar to UniRef100_Q8LDE3 Cluster: Enhanced disease
susceptibility 5; n=1; Arabidopsis thaliana|Rep:
Enhanced disease susceptibility 5 - Arabidopsis thaliana
(Mouse-ear cress), partial (27%)
Length = 764
Score = 1515 bits (764), Expect = 0.0
Identities = 764/764 (100%)
Strand = Plus / Plus
Query: 87 ctcacacccaacaaaaatggcacactcttttcacaccttccccctcaaagccccaaacct 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcacacccaacaaaaatggcacactcttttcacaccttccccctcaaagccccaaacct 60
Query: 147 cacacaaccgtcaccatctccaccacgctcaaaccgccaccactcacctcttcacttcct 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cacacaaccgtcaccatctccaccacgctcaaaccgccaccactcacctcttcacttcct 120
Query: 207 caacgccgccgccactcattcaaacccgcgccggcgcctcctcattctaccatcaagacg 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caacgccgccgccactcattcaaacccgcgccggcgcctcctcattctaccatcaagacg 180
Query: 267 gcgtcgcattgatttcgtaaccgctcgcgcagttacagatcgcgacctcactgatgaatc 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcgtcgcattgatttcgtaaccgctcgcgcagttacagatcgcgacctcactgatgaatc 240
Query: 327 tgaatacagagaacaacaaatcggcgagggttctgaagtggcggaggcgagtctgggaga 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgaatacagagaacaacaaatcggcgagggttctgaagtggcggaggcgagtctgggaga 300
Query: 387 gggaacggaactggcggagcagaatgtgtgggttcagatgaaggaaatcgtgaaattcac 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gggaacggaactggcggagcagaatgtgtgggttcagatgaaggaaatcgtgaaattcac 360
Query: 447 agggcctgtggcggggatttggttgtgtggaccgttgatgagtctcatcgatactgcggt 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agggcctgtggcggggatttggttgtgtggaccgttgatgagtctcatcgatactgcggt 420
Query: 507 tgttggtcagggaagctctgttgagcttgctgctttaggtcctgcaacggttttttgtga 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgttggtcagggaagctctgttgagcttgctgctttaggtcctgcaacggttttttgtga 480
Query: 567 ttatttgagctacaccttcatgtttctgtcggttgcaacttccaatatggttgctactgc 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttatttgagctacaccttcatgtttctgtcggttgcaacttccaatatggttgctactgc 540
Query: 627 cctcgccaaacaggatagggaggaagtgcagcatcacatatctgtcttgctttttattgg 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cctcgccaaacaggatagggaggaagtgcagcatcacatatctgtcttgctttttattgg 600
Query: 687 gttaggatgtggcttggtgatgcttgtgttcacaaggttgtttgctgcagcaacactaac 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gttaggatgtggcttggtgatgcttgtgttcacaaggttgtttgctgcagcaacactaac 660
Query: 747 tgcttttactgggctgaagaatgtgcatgtagtaccagcagctaatacttatgtccagat 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgcttttactgggctgaagaatgtgcatgtagtaccagcagctaatacttatgtccagat 720
Query: 807 tcgaggcttggcatggcctgctttacttattggatgggttgctc 850
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tcgaggcttggcatggcctgctttacttattggatgggttgctc 764
>gnl|LJGI|TC68853 similar to UniRef100_A7P7W6 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (23%)
Length = 694
Score = 912 bits (460), Expect = 0.0
Identities = 463/464 (99%)
Strand = Plus / Plus
Query: 1295 gagtaaatcggagtttggcaaaggctcgatcacttcttaggtctcttgtaattatcggag 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagtaaatcggagtttggcaaaggctcgatcacttcttaggtctcttgtaattatcggag 60
Query: 1355 ttatacttggattgttttttgggattgttggaacatctgttccttggttattcccataca 1414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttatacttggattgttttttgggattgttggaacatctgttccttggttattcccataca 120
Query: 1415 tttttacatctgatcagatggtcatccaggagatgcataggattctgattccatactttg 1474
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 121 tttttacatctgatcagatggtcatccaggagatgcataggattttgattccatactttg 180
Query: 1475 tagctctatccgtgacacccactattgtcggcctggagggaacaatgctggctggacggg 1534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tagctctatccgtgacacccactattgtcggcctggagggaacaatgctggctggacggg 240
Query: 1535 atcttagatttttaagcttgtcaatgattggatgctttttgctgaatactgtagtgttat 1594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atcttagatttttaagcttgtcaatgattggatgctttttgctgaatactgtagtgttat 300
Query: 1595 tgaccttgagtagtagatatggtttacaaggctgttggtttgcccttgctggatttcagt 1654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgaccttgagtagtagatatggtttacaaggctgttggtttgcccttgctggatttcagt 360
Query: 1655 ggactcgatttttatcagcccttctgcgccttctctcacccaatggcattttattctcgg 1714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggactcgatttttatcagcccttctgcgccttctctcacccaatggcattttattctcgg 420
Query: 1715 aagatttaggccagtatgagctgcaaaagttgaagactacctag 1758
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aagatttaggccagtatgagctgcaaaagttgaagactacctag 464
>gnl|LJGI|TC82338 similar to UniRef100_Q8LDE3 Cluster: Enhanced disease susceptibility
5; n=1; Arabidopsis thaliana|Rep: Enhanced disease
susceptibility 5 - Arabidopsis thaliana (Mouse-ear
cress), partial (27%)
Length = 577
Score = 888 bits (448), Expect = 0.0
Identities = 448/448 (100%)
Strand = Plus / Plus
Query: 630 cgccaaacaggatagggaggaagtgcagcatcacatatctgtcttgctttttattgggtt 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 cgccaaacaggatagggaggaagtgcagcatcacatatctgtcttgctttttattgggtt 189
Query: 690 aggatgtggcttggtgatgcttgtgttcacaaggttgtttgctgcagcaacactaactgc 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 aggatgtggcttggtgatgcttgtgttcacaaggttgtttgctgcagcaacactaactgc 249
Query: 750 ttttactgggctgaagaatgtgcatgtagtaccagcagctaatacttatgtccagattcg 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttttactgggctgaagaatgtgcatgtagtaccagcagctaatacttatgtccagattcg 309
Query: 810 aggcttggcatggcctgctttacttattggatgggttgctcagagtgcaagtcttggcat 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aggcttggcatggcctgctttacttattggatgggttgctcagagtgcaagtcttggcat 369
Query: 870 gaaagattcgtggggacccttgaaagctttggctgctgccagtgttataaatggaattgg 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gaaagattcgtggggacccttgaaagctttggctgctgccagtgttataaatggaattgg 429
Query: 930 tgatatagttttatgcacctatttaggttatggtattgcaggggcagcatgggccacatt 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tgatatagttttatgcacctatttaggttatggtattgcaggggcagcatgggccacatt 489
Query: 990 ggcttcacaagttgttgctgcgtatatgatgagccaaactctaaacaataagggatacaa 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ggcttcacaagttgttgctgcgtatatgatgagccaaactctaaacaataagggatacaa 549
Query: 1050 tgcgtttgccttctccattccttcagct 1077
||||||||||||||||||||||||||||
Sbjct: 550 tgcgtttgccttctccattccttcagct 577
Score = 250 bits (126), Expect = 3e-65
Identities = 132/134 (98%)
Strand = Plus / Plus
Query: 87 ctcacacccaacaaaaatggcacactcttttcacaccttccccctcaaagccccaaacct 146
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 ctcacacccaacaaaaatggcacactcttttcacaccttccccctcaaaaccccaaacct 60
Query: 147 cacacaaccgtcaccatctccaccacgctcaaaccgccaccactcacctcttcacttcct 206
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 cacacaaccgtcaccatctccaccacactcaaaccgccaccactcacctcttcacttcct 120
Query: 207 caacgccgccgcca 220
||||||||||||||
Sbjct: 121 caacgccgccgcca 134
>gnl|LJGI|TC59031 similar to UniRef100_Q945F0 Cluster: Enhanced disease
susceptibility 5; n=2; Arabidopsis thaliana|Rep:
Enhanced disease susceptibility 5 - Arabidopsis thaliana
(Mouse-ear cress), partial (27%)
Length = 814
Score = 272 bits (137), Expect = 7e-72
Identities = 272/317 (85%)
Strand = Plus / Plus
Query: 472 tgtggaccgttgatgagtctcatcgatactgcggttgttggtcagggaagctctgttgag 531
||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| |||||
Sbjct: 482 tgtggaccgcttatgagtctcattgatactgctgttattggtcagggaagctccattgag 541
Query: 532 cttgctgctttaggtcctgcaacggttttttgtgattatttgagctacaccttcatgttt 591
|||||||| ||||||||||| || ||| |||||||| | |||||||| |||||||||
Sbjct: 542 cttgctgcattaggtcctgctactgttgtttgtgataacttgagctatgtgttcatgttt 601
Query: 592 ctgtcggttgcaacttccaatatggttgctactgccctcgccaaacaggatagggaggaa 651
|| || ||||| |||||||||||||||||||||||||| || |||||||||||||| |||
Sbjct: 602 ctatcagttgctacttccaatatggttgctactgcccttgctaaacaggatagggaagaa 661
Query: 652 gtgcagcatcacatatctgtcttgctttttattgggttaggatgtggcttggtgatgctt 711
|||||||||||||||||||||||||||||||||||| ||| ||||| || ||||||||
Sbjct: 662 gtgcagcatcacatatctgtcttgctttttattgggctagcttgtggtttcatgatgctt 721
Query: 712 gtgttcacaaggttgtttgctgcagcaacactaactgcttttactgggctgaagaatgtg 771
| |||||| || | |||| ||| ||||| || |||||||| || || | ||||||||
Sbjct: 722 ttattcacagggctatttggtgctgcaacgctcactgctttcacaggtcctaagaatgta 781
Query: 772 catgtagtaccagcagc 788
||||||||||| |||||
Sbjct: 782 catgtagtacctgcagc 798
>gnl|LJGI|TC60934 similar to UniRef100_A7P7W5 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (19%)
Length = 718
Score = 170 bits (86), Expect = 2e-41
Identities = 374/470 (79%)
Strand = Plus / Plus
Query: 1283 aattgatgtatggagtaaatcggagtttggcaaaggctcgatcacttcttaggtctcttg 1342
||||||| ||||||||||| ||||||||| ||||||| || ||| | ||||||||||
Sbjct: 1 aattgatatatggagtaaaccggagtttgtcaaaggcccggatgcttttgaggtctcttg 60
Query: 1343 taattatcggagttatacttggattgttttttgggattgttggaacatctgttccttggt 1402
| || || |||| | |||||||||||| || || ||||||||||| || ||||||||||
Sbjct: 61 tgataattggagccacacttggattgttgttaggaattgttggaacctcagttccttggt 120
Query: 1403 tattcccatacatttttacatctgatcagatggtcatccaggagatgcataggattctga 1462
|||| || || |||||||| |||||||||||||||||||||||||||||| | ||||
Sbjct: 121 tatttccctatgtttttacacctgatcagatggtcatccaggagatgcataaagtgctga 180
Query: 1463 ttccatactttgtagctctatccgtgacacccactattgtcggcctggagggaacaatgc 1522
|||||||||| |||| || | ||||| ||| ||| | |||| |||||||| |||
Sbjct: 181 ttccatacttcatagccctggctgtgacgccccctactcatagccttgagggaacgttgc 240
Query: 1523 tggctggacgggatcttagatttttaagcttgtcaatgattggatgctttttgctgaata 1582
||||||| ||||||| |||| | |||| ||||||||| |||||||||| || |
Sbjct: 241 tggctgggagggatctaagatatataagtttgtcaatgggcggatgcttttgcgtgggtg 300
Query: 1583 ctgtagtgttattgaccttgagtagtagatatggtttacaaggctgttggtttgcccttg 1642
|||| ||||| ||||||||| ||||| ||||| ||||| ||||||||||||||||
Sbjct: 301 tactagtactattgttcttgagtagcagatacggtttgcaaggttgttggtttgcccttg 360
Query: 1643 ctggatttcagtggactcgatttttatcagcccttctgcgccttctctcacccaatggca 1702
| |||||| ||| |||| |||| || ||||| | ||| ||||| || |||| |||||
Sbjct: 361 cattatttcaatgggctcggttttcattggccctccagcgtcttctttctcccactggca 420
Query: 1703 ttttattctcggaagatttaggccagtatgagctgcaaaagttgaagact 1752
|||||| | |||||||| | |||| |||||||||||||| | ||||||
Sbjct: 421 ttttatacgcggaagatattaaccagaatgagctgcaaaagctaaagact 470