Miyakogusa Predicted Gene
- Lj3g3v3362010.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3362010.1 Non Chatacterized Hit- tr|K4B3J1|K4B3J1_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,34.85,0.000000002,seg,NULL,CUFF.45690.1
(1557 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|CB829237 homologue to UniRef100_A7P8Y3 Cluster: Chromos... 1074 0.0
gnl|LJGI|TC68934 803 0.0
gnl|LJGI|GO006512 119 5e-26
>gnl|LJGI|CB829237 homologue to UniRef100_A7P8Y3 Cluster: Chromosome chr3 scaffold_8
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:,
partial (2%)
Length = 567
Score = 1074 bits (542), Expect = 0.0
Identities = 559/567 (98%)
Strand = Plus / Plus
Query: 959 agcgccgtaagactcaaaattatactgcaaatccaaacattgcagaccagactgcattct 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcgccgtaagactcaaaattatactgcaaatccaaacattgcagaccagactgcattct 60
Query: 1019 ttgagtcaactaaaccacagaaattttgtgatgtaaccacctctttggtaccgcaagttc 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgagtcaactaaaccacagaaattttgtgatgtaaccacctctttggtaccgcaagttc 120
Query: 1079 cgtgtgctgtgcatgacgtggagactatgaagatatacactggtattgattcagtagaag 1138
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgtgtgctgttcatgacgtggagactatgaagatatacactggtattgattcagtagaag 180
Query: 1139 aatcgtcaagaggtcatcccaaactttcccagacaactcaccatcttctgatgtccnnnn 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatcgtcaagaggtcatcccaaactttcccagacaactcaccatcttctgatgtccaaaa 240
Query: 1199 nnnctgatgttaatctacctgacagaggtcagttctttagagattcagcagctcctacca 1258
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaactgatgttaatctacctgacagaggtcagttctttagagattcagcagctcctacca 300
Query: 1259 aattcagaggaaacactttcaataggatcattgatctctcttcacccatgagcaaccatg 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aattcagaggaaacactttcaataggatcattgatctctcttcacccatgagcaaccatg 360
Query: 1319 ctcgggaaggtcttaagctggaaactcaagggagctccagaaagactgaaggaaaggaaa 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctcgggaaggtcttaagctggaaactcaagggagctccagaaagactgaaggaaaggaaa 420
Query: 1379 atgtccaagatttcaaatgtccgacaaacttgaagaatgaatcatctgctgagacagaca 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgtccaagatttcaaatgtccgacaaacttgaagaatgaatcatctgctgagacagaca 480
Query: 1439 ctatggacatcagtgctttacatgagactcttcctggtgatgttccattgcaaataaata 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctatggacatcagtgctttacatgagactcttcctggtgatgttccattgcaaataaata 540
Query: 1499 agtgcttcaaggatagtcaaaacttgc 1525
|||||||||||||||||||||||||||
Sbjct: 541 agtgcttcaaggatagtcaaaacttgc 567
>gnl|LJGI|TC68934
Length = 588
Score = 803 bits (405), Expect = 0.0
Identities = 405/405 (100%)
Strand = Plus / Plus
Query: 1 atgatgcctgatgatgttgctgcatgtcatgatggtgagagggtggatgctccagcaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 atgatgcctgatgatgttgctgcatgtcatgatggtgagagggtggatgctccagcaatg 243
Query: 61 catgggtccaaatcggcatggatgtctcactgggcgaacacgagttgtaaatcagcaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 catgggtccaaatcggcatggatgtctcactgggcgaacacgagttgtaaatcagcaacc 303
Query: 121 cctgctcgcagtcatttgactttgagggttggttgtaagcttaaagaagtcaaagaacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 cctgctcgcagtcatttgactttgagggttggttgtaagcttaaagaagtcaaagaacac 363
Query: 181 agtgatgctgagaagcatggtgaaatcctcgggtcagaagttgcggttgatagttctatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 agtgatgctgagaagcatggtgaaatcctcgggtcagaagttgcggttgatagttctatg 423
Query: 241 catgctggagacgttggagaagcatctggggccacaagggttagcttaaacaatggggcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 catgctggagacgttggagaagcatctggggccacaagggttagcttaaacaatggggcg 483
Query: 301 aataccggaaagtcaaagaaaacaaactttgattccaaatcatatcctatttttaacttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 aataccggaaagtcaaagaaaacaaactttgattccaaatcatatcctatttttaacttt 543
Query: 361 cccaggaagatagatcgaggattgtccacgcagggggaacagaat 405
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cccaggaagatagatcgaggattgtccacgcagggggaacagaat 588
>gnl|LJGI|GO006512
Length = 174
Score = 119 bits (60), Expect = 5e-26
Identities = 67/68 (98%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 1490 aaataaataagtgcttcaaggatagtcaaaacttgctcacgtctcaagttgcagaaactt 1549
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aaataaataa-tgcttcaaggatagtcaaaacttgctcacgtctcaagttgcagaaactt 60
Query: 1550 cagccaga 1557
||||||||
Sbjct: 61 cagccaga 68