Miyakogusa Predicted Gene
- Lj3g3v3360870.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3360870.1 Non Chatacterized Hit- tr|I1LJC6|I1LJC6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.36234
PE,66.14,0,seg,NULL; helix loop helix domain,Helix-loop-helix domain;
HLH,Helix-loop-helix domain; no descripti,CUFF.45674.1
(1230 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81638 similar to UniRef100_A7P900 Cluster: Chromosome... 1080 0.0
gnl|LJGI|TC63046 981 0.0
gnl|LJGI|TC64062 234 1e-60
gnl|LJGI|TC72547 weakly similar to UniRef100_UPI0000354487 Clust... 76 6e-13
gnl|LJGI|CB828026 similar to UniRef100_A7PNA9 Cluster: Chromosom... 52 8e-06
gnl|LJGI|AV772495 homologue to UniRef100_A2Q3E9 Cluster: Helix-l... 52 8e-06
>gnl|LJGI|TC81638 similar to UniRef100_A7P900 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (31%)
Length = 856
Score = 1080 bits (545), Expect = 0.0
Identities = 569/573 (99%), Gaps = 3/573 (0%)
Strand = Plus / Plus
Query: 661 agaagggagaaaattagcgagaggatgaagtatttacaagatttagtacccggttgcaac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaagggagaaaattagcgagaggatgaagtatttacaagatttagtacccggttgcaac 60
Query: 721 aaaattgcaggaaaagctggaatgcttgatgaaatcattaactacgttcagtctcttcaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaattgcaggaaaagctggaatgcttgatgaaatcattaactacgttcagtctcttcaa 120
Query: 781 cgacaagttgagttcctgtcaatgaaattagctgctgtaaatccaaggcttgacttcaac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgacaagttgagttcctgtcaatgaaattagctgctgtaaatccaaggcttgacttcaac 180
Query: 841 attgatgaattgtttgtcaaagaggtgtttcctgcttgtgctcaaagttttccatccata 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attgatgaattgtttgtcaaagaggtgtttcctgcttgtgctcaaagttttccatccata 240
Query: 901 gggatgcaatcagacatgaccaaccaccccgcatatctacaattcaattcagcacaacaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggatgcaatcagacatgaccaaccaccccgcatatctacaattcaattcagcacaacaa 300
Query: 961 cttgtttcctattgtggt-ggattagtaaa-caacacagagataatccctacggatatgg 1018
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 301 cttgtttcctattgtggtgggattagtaaaccaacacagagataatccctacggatatgg 360
Query: 1019 gggtt-cgaaggaacatgaatgtccctgtatctatgcctgaaacgtttcttgactcatca 1077
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gggttccgaaggaacatgaatgtccctgtatctatgcctgaaacgtttcttgactcatca 420
Query: 1078 tgtttcactcaaattctaccctccttatcatgggaaggtgatttccaaaacctccaaagt 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgtttcactcaaattctaccctccttatcatgggaaggtgatttccaaaacctccaaagt 480
Query: 1138 gtggcttttgaccaaggaagatcatcatcctttccttctcagccatttacagatttggtt 1197
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 481 gtggcttttgaccaaggaagatcatcatcctttccttttcagccatttacagatttggtt 540
Query: 1198 gaagccagtgacctgaagatggagatgtaaagc 1230
|||||||||||||||||||||||||||||||||
Sbjct: 541 gaagccagtgacctgaagatggagatgtaaagc 573
>gnl|LJGI|TC63046
Length = 717
Score = 981 bits (495), Expect = 0.0
Identities = 495/495 (100%)
Strand = Plus / Plus
Query: 1 atgttgcactgtctcaacacttcagggactgtgggaggtggaggaggaggagcttgttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 atgttgcactgtctcaacacttcagggactgtgggaggtggaggaggaggagcttgttcc 282
Query: 61 gacatgacagtgctggaaaggcaaagggtaagcagcaagaagtggcagcatgagcaggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gacatgacagtgctggaaaggcaaagggtaagcagcaagaagtggcagcatgagcaggag 342
Query: 121 catgagaatcaaggctatttttgtggtggtggtgctgattctgcgcttggtgaggtggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 catgagaatcaaggctatttttgtggtggtggtgctgattctgcgcttggtgaggtggtg 402
Query: 181 gctcgctctgtgaaacctgacccgggttttgaaaacgggtggcctgaattgggaaagttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gctcgctctgtgaaacctgacccgggttttgaaaacgggtggcctgaattgggaaagttt 462
Query: 241 gttgttgcgggattcgggtctgggtttgatgctagctctgcaatttcaaggacttgtagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gttgttgcgggattcgggtctgggtttgatgctagctctgcaatttcaaggacttgtagc 522
Query: 301 aatggtgacttggtttctgctaccaagaagatgatgggttccgtgagtgggaaagaaagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 aatggtgacttggtttctgctaccaagaagatgatgggttccgtgagtgggaaagaaagc 582
Query: 361 ttgaagaagaggaaagctgataataaggctcagaattccaattccaaggtttttgtggag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ttgaagaagaggaaagctgataataaggctcagaattccaattccaaggtttttgtggag 642
Query: 421 agtgatagcaaagacaagaggatcaaagtgagtggtgaggaaggggaatccaaaaccaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 agtgatagcaaagacaagaggatcaaagtgagtggtgaggaaggggaatccaaaaccaca 702
Query: 481 gagaaaaccagcaac 495
|||||||||||||||
Sbjct: 703 gagaaaaccagcaac 717
>gnl|LJGI|TC64062
Length = 669
Score = 234 bits (118), Expect = 1e-60
Identities = 118/118 (100%)
Strand = Plus / Plus
Query: 1113 aggtgatttccaaaacctccaaagtgtggcttttgaccaaggaagatcatcatcctttcc 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aggtgatttccaaaacctccaaagtgtggcttttgaccaaggaagatcatcatcctttcc 332
Query: 1173 ttctcagccatttacagatttggttgaagccagtgacctgaagatggagatgtaaagc 1230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ttctcagccatttacagatttggttgaagccagtgacctgaagatggagatgtaaagc 390
Score = 103 bits (52), Expect = 3e-21
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 1 atgttgcactgtctcaacacttcagggactgtgggaggtggaggaggaggag 52
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 atgttgcactgtctcaacacttcagggactgtgggaggtggaggaggaggag 274
>gnl|LJGI|TC72547 weakly similar to UniRef100_UPI0000354487 Cluster: PREDICTED:
serine (or cysteine) proteinase inhibitor, clade A,
member 3A isoform 1; n=1; Mus musculus|Rep: PREDICTED:
serine (or cysteine) proteinase inhibitor, clade A,
member 3A isoform 1 - Mus musculus, partial (8%)
Length = 691
Score = 75.8 bits (38), Expect = 6e-13
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 502 accaagtcctgcacaaacagaaacagcagggaaacttc 539
||||||||||||||||||||||||||||||||||||||
Sbjct: 654 accaagtcctgcacaaacagaaacagcagggaaacttc 691
>gnl|LJGI|CB828026 similar to UniRef100_A7PNA9 Cluster: Chromosome chr1 scaffold_22,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_22, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 526
Score = 52.0 bits (26), Expect = 8e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 742 atgcttgatgaaatcattaactacgttcagtctcttcaacgacaagttgagttcctgtca 801
||||| ||||||||||| ||||| || ||||| |||||| |||| |||||||| ||||
Sbjct: 251 atgctagatgaaatcatcaactatgtacagtcacttcaaagacaggttgagtttttgtcc 310
Query: 802 atgaaa 807
||||||
Sbjct: 311 atgaaa 316
>gnl|LJGI|AV772495 homologue to UniRef100_A2Q3E9 Cluster: Helix-loop-helix
DNA-binding; n=1; Medicago truncatula|Rep:
Helix-loop-helix DNA-binding - Medicago truncatula
(Barrel medic), partial (19%)
Length = 572
Score = 52.0 bits (26), Expect = 8e-06
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 616 cgtcgtggtcaagccacggatagtcatagcttagctgaaagg 657
||||| |||||||| || ||||||||||||||||| ||||||
Sbjct: 447 cgtcgaggtcaagctactgatagtcatagcttagcagaaagg 406