Miyakogusa Predicted Gene

Lj3g3v3348680.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3348680.1 Non Chatacterized Hit- tr|I1K773|I1K773_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40163
PE,70.8,0,Leucine-rich repeats, typical (most populate,Leucine-rich
repeat, typical subtype; Serine/Threonine ,CUFF.45667.1
         (2574 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80916 similar to UniRef100_A7NTC2 Cluster: Chromosome...   178   1e-43
gnl|LJGI|FS331431 weakly similar to UniRef100_A7NTC2 Cluster: Ch...    92   2e-17

>gnl|LJGI|TC80916 similar to UniRef100_A7NTC2 Cluster: Chromosome chr18 scaffold_1,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr18 scaffold_1, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (17%)
          Length = 1034

 Score =  178 bits (90), Expect = 1e-43
 Identities = 252/306 (82%)
 Strand = Plus / Plus

                                                                        
Query: 2104 tatgacaaggagctcttgacaaaaatagtggatccgtctctgatggtggatgatgatctc 2163
            ||||||||||||||   ||||||||| || || || |||||||| || ||||| ||| ||
Sbjct: 52   tatgacaaggagcttgggacaaaaattgttgacccatctctgattgttgatgaggatttc 111

                                                                        
Query: 2164 ttagaggaagtgtgggcaatggcgattgttgccaagtcttgcctaaatcccaaatcttca 2223
            ||||||||||||||||| || || |||||||||| ||||||||||||||| ||| |||||
Sbjct: 112  ttagaggaagtgtgggctatagccattgttgccaggtcttgcctaaatccaaaaccttca 171

                                                                        
Query: 2224 agaagaccccctatgaaatatgttctcagggctttggaaaaccctctcagagttgtgagg 2283
            ||||| || || |||| |||| | |||| |||||||||||||||| | | ||||||||||
Sbjct: 172  agaaggcctccaatgagatatatcctcaaggctttggaaaaccctttaaaagttgtgagg 231

                                                                        
Query: 2284 gaagaaagtttcagctcatcgcggctcagaacaacctcttctagaagctcttggaatgct 2343
            ||||||  ||   | ||  | ||||||| | |||||||||||||| |||| |||||||| 
Sbjct: 232  gaagaagcttctggttctgcacggctcaaagcaacctcttctagaggctcctggaatgca 291

                                                                        
Query: 2344 gcattgtttggtagttggcgccatagctcatcggatgtgacagtgattccaccagcctct 2403
             | ||||| ||||| ||||| || || |  |||||||| ||||  |||||| ||||||||
Sbjct: 292  accttgttcggtagctggcgtcagagtttgtcggatgtaacagcaattccagcagcctct 351

                  
Query: 2404 ggtaca 2409
            ||||||
Sbjct: 352  ggtaca 357


>gnl|LJGI|FS331431 weakly similar to UniRef100_A7NTC2 Cluster: Chromosome chr18
           scaffold_1, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (7%)
          Length = 714

 Score = 91.7 bits (46), Expect = 2e-17
 Identities = 91/106 (85%)
 Strand = Plus / Plus

                                                                       
Query: 139 tctttgggcttgaggagcaaggaatggccaataaagggtgacccttgttttatctggagt 198
           |||||||| |||||||||||||||||||||| |||    ||||||||||| ||||||| |
Sbjct: 609 tctttggggttgaggagcaaggaatggccaagaaaaccagacccttgtttaatctggatt 668

                                                         
Query: 199 ggtgtgagttgccagaatggtagtgttgttggcatcaacatctctg 244
           ||| | | ||| ||||||||| ||||| |||| |||||||||||||
Sbjct: 669 ggtattacttgtcagaatggtcgtgttattgggatcaacatctctg 714