Miyakogusa Predicted Gene
- Lj3g3v3348630.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3348630.1 Non Chatacterized Hit- tr|H9MB41|H9MB41_PINLA
Uncharacterized protein (Fragment) OS=Pinus
lambertian,42.75,6e-17,seg,NULL; 2-HYDROXYACID DEHYDROGENASE,NULL;
2-HYDROXYACID DEHYDROGENASE-RELATED,NULL,CUFF.45665.1
(939 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68600 similar to UniRef100_A7P916 Cluster: Chromosome... 1045 0.0
gnl|LJGI|FS321772 similar to UniRef100_A7P916 Cluster: Chromosom... 771 0.0
gnl|LJGI|TC77873 similar to UniRef100_A7P916 Cluster: Chromosome... 402 e-111
gnl|LJGI|DC595656 196 2e-49
gnl|LJGI|BP047627 similar to UniRef100_A7P916 Cluster: Chromosom... 113 2e-24
>gnl|LJGI|TC68600 similar to UniRef100_A7P916 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 750
Score = 1045 bits (527), Expect = 0.0
Identities = 566/583 (97%), Gaps = 16/583 (2%)
Strand = Plus / Plus
Query: 373 ctgctttctggggctttagagttatgtcatagcaatggtgatgttggggaatcaagttat 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgctttctggggctttagagttatgtcatagcaatggtgatgttggggaatcaagttat 60
Query: 433 aatggacaaaggtggagcatgaactgtgagtcaaatataactcatggcaccagcttcttt 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatggacaaaggtggagcatgaactgtgagtcaaatataactcatggcaccagcttcttt 120
Query: 493 aaaggaaagcaacttttgttgccggactcgaagctccccacagttgaggtctacattgcg 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaggaaagcaacttttgttgccggactcgaagctccccacagttgaggtctacattgcg 180
Query: 553 gggtccttctcgggtactccgattatcttgacaaaaaccctgcagcttagttcacagaaa 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gggtccttctcgggtactccgattatcttgacaaaaaccctgcagcttagttcacagaaa 240
Query: 613 aggcatgcgaggaagggggtattggatgcaattccggagcatgaagcaactgaagatggg 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggcatgcgaggaagggggtattggatgcaattccggagcatgaagcaactgaagatggg 300
Query: 673 agagatccttcttcagaacttgctctgcaggccccagattacctttacaacaaacatgaa 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agagatccttcttcagaacttgctctgcaggccccagattacctttacaacaaacatgaa 360
Query: 733 gatgaggattataataccctatactcaagaacagcatatgctgagggcgaagatggagaa 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gatgaggattataataccctatactcaagaacagcatatgctgagggcgaagatggagaa 420
Query: 793 ctttcatggtttaatgctggtgttagggtgggtgttggtattggactcagtgtttgtctt 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctttcatggtttaatgctggtgttagggtgggtgttggtattggactcagtgtttgtctt 480
Query: 853 ggaattggcattggagttggcgtgctagttaaaa----------------ncgacagttc 896
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 481 ggaattggcattggagttggcgtgctagttaaaacctaccaaggcaccactcgacagttc 540
Query: 897 agaagacggccattctaatcggtgctcttatagtcttatttaa 939
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agaagacggccattctaatcggtgctcttatagtcttatttaa 583
>gnl|LJGI|FS321772 similar to UniRef100_A7P916 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 734
Score = 771 bits (389), Expect = 0.0
Identities = 389/389 (100%)
Strand = Plus / Plus
Query: 1 atggagaattctcacaaggcgaatggaaatggaccaactgataatggatactctgttgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 atggagaattctcacaaggcgaatggaaatggaccaactgataatggatactctgttgca 405
Query: 61 aggcactcttatcaaccctccataaagggatcattaccttggctcgacattagggtgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 aggcactcttatcaaccctccataaagggatcattaccttggctcgacattagggtgttt 465
Query: 121 tatgtaagagtttgcaagtgtgagcttgatgactccactcctgagattcttacactgagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tatgtaagagtttgcaagtgtgagcttgatgactccactcctgagattcttacactgagc 525
Query: 181 catgttcctttaaatcctgatacccttctcgaagttaatggcgttcgtactagtatatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 catgttcctttaaatcctgatacccttctcgaagttaatggcgttcgtactagtatatac 585
Query: 241 tctgatgggatctcaacccttcttaaaagagacaggatagataggaaatcagaagaagtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tctgatgggatctcaacccttcttaaaagagacaggatagataggaaatcagaagaagtg 645
Query: 301 acattcgtgagcactgatagcataaggatgagtggtagtgtgaaatttgaggtgttcgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 acattcgtgagcactgatagcataaggatgagtggtagtgtgaaatttgaggtgttcgat 705
Query: 361 aaagatattctactgctttctggggcttt 389
|||||||||||||||||||||||||||||
Sbjct: 706 aaagatattctactgctttctggggcttt 734
>gnl|LJGI|TC77873 similar to UniRef100_A7P916 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 600
Score = 402 bits (203), Expect = e-111
Identities = 242/259 (93%), Gaps = 16/259 (6%)
Strand = Plus / Plus
Query: 697 ctgcaggccccagattacctttacaacaaacatgaagatgaggattataataccctatac 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 ctgcaggccccagattacctttacaacaaacatgaagatgaggattataataccctatac 176
Query: 757 tcaagaacagcatatgctgagggcgaagatggagaactttcatggtttaatgctggtgtt 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 tcaagaacagcatatgctgagggcgaagatggagaactttcatggtttaatgctggtgtt 236
Query: 817 agggtgggtgttggtattggactcagtgtttgtcttggaattggcattggagttggcgtg 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 agggtgggtgttggtattggactcagtgtttgtcttggaattggcattggagttggcgtg 296
Query: 877 ctagttaaaa----------------ncgacagttcagaagacggccattctaatcggtg 920
|||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 297 ctagttaaaacctaccaaggcaccactcgacagttcagaagacggccattctaatcggtg 356
Query: 921 ctcttatagtcttatttaa 939
|||||||||||||||||||
Sbjct: 357 ctcttatagtcttatttaa 375
>gnl|LJGI|DC595656
Length = 512
Score = 196 bits (99), Expect = 2e-49
Identities = 104/106 (98%)
Strand = Plus / Plus
Query: 1 atggagaattctcacaaggcgaatggaaatggaccaactgataatggatactctgttgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 atggagaattctcacaaggcgaatggaaatggaccaactgataatggatactctgttgnc 466
Query: 61 aggcactcttatcaaccctccataaagggatcattaccttggctcg 106
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 aggcactcttatcaaccctccataaagggatcattaccttggctcg 512
>gnl|LJGI|BP047627 similar to UniRef100_A7P916 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 237
Score = 113 bits (57), Expect = 2e-24
Identities = 111/133 (83%), Gaps = 16/133 (12%)
Strand = Plus / Minus
Query: 823 ggtgttggtattggactcagtgtttgtcttggaattggcattggagttggcgtgctagtt 882
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ggtgttggtattggactccgtgtttgtcttggaattggcattggagttggcgtgctagtt 178
Query: 883 aaaa----------------ncgacagttcagaagacggccattctaatcggtgctctta 926
||| |||| ||||||||||||||| |||| |||||||||||||
Sbjct: 177 taaacctacccaggcccccctcgaccgttcagaagacggcccttcttatcggtgctctta 118
Query: 927 tagtcttatttaa 939
|||||||||||||
Sbjct: 117 tagtcttatttaa 105