Miyakogusa Predicted Gene
- Lj3g3v3348620.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3348620.1 Non Chatacterized Hit- tr|B8LN85|B8LN85_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,28.74,0.0000000002,seg,NULL,CUFF.45682.1
(782 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66400 weakly similar to UniRef100_A7P917 Cluster: Chr... 1471 0.0
gnl|LJGI|TC72043 similar to UniRef100_A7P917 Cluster: Chromosome... 76 4e-13
>gnl|LJGI|TC66400 weakly similar to UniRef100_A7P917 Cluster: Chromosome chr3
scaffold_8, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr3 scaffold_8, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (31%)
Length = 811
Score = 1471 bits (742), Expect = 0.0
Identities = 756/763 (99%)
Strand = Plus / Plus
Query: 1 atgattccgaccaccggcgttcccaagaagaggcagcgcaccgccgctacccgccattcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 atgattccgaccaccggcgttcccaagaagaggcagcgcaccgccgctacccgccattcc 108
Query: 61 ttcaccgccgccaccaccaccaacnnnnnnncattcacccgaaactctccaagcaccacc 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 109 ttcaccgccgccaccaccaccaacaacaaaacattcacccgaaactctccaagcaccacc 168
Query: 121 accggcgacgccctctactttaacgacgcatccaccgccgacatcatcctccgccttttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 accggcgacgccctctactttaacgacgcatccaccgccgacatcatcctccgccttttc 228
Query: 181 atcgacactgccgattccccgctggaatcctccccctccgtcgaggactccgacctccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 atcgacactgccgattccccgctggaatcctccccctccgtcgaggactccgacctccac 288
Query: 241 gtatacctccactccaccattctccgccgcgccaaatacttctccgccctattgtccgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gtatacctccactccaccattctccgccgcgccaaatacttctccgccctattgtccgac 348
Query: 301 cgctggatcggcctcgtccatcctcatacgtcttcgccggaaaactcctcctcctccggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 cgctggatcggcctcgtccatcctcatacgtcttcgccggaaaactcctcctcctccggt 408
Query: 361 tccgatcgcggcgaactattccgcctcaacctcggagtttctcccactccaggctcgatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tccgatcgcggcgaactattccgcctcaacctcggagtttctcccactccaggctcgatc 468
Query: 421 cagaaccacctcaccgtgctggagcttctctacacgagcgatttcgccaacaccgtcaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 cagaaccacctcaccgtgctggagcttctctacacgagcgatttcgccaacaccgtcaat 528
Query: 481 aacgcctccaccgcgctggatctgctcccggtggcgctggaattgctgttcgaggagtgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 aacgcctccaccgcgctggatctgctcccggtggcgctggaattgctgttcgaggagtgc 588
Query: 541 gttcgctggtgtgtagcgtttctggaagcggtgccgtggacggaggaggaagagaacagg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gttcgctggtgtgtagcgtttctggaagcggtgccgtggacggaggaggaagagaacagg 648
Query: 601 gtggtgagcttgatccctttcctgaacgaggaagaatcgaaggagctcgtggctagggtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 gtggtgagcttgatccctttcctgaacgaggaagaatcgaaggagctcgtggctagggtt 708
Query: 661 tctcctgtcggtgaagatgcatgcgaagcgatgctcgaaggtctgatctcttcggcgatg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 tctcctgtcggtgaagatgcatgcgaagcgatgctcgaaggtctgatctcttcggcgatg 768
Query: 721 aacaattaccagaacacggcgttcgtgaaggcgtttgtgggga 763
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 aacaattaccagaacacggcgttcgtgaaggcgtttgtgggga 811
>gnl|LJGI|TC72043 similar to UniRef100_A7P917 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 1036
Score = 75.8 bits (38), Expect = 4e-13
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 741 gttcgtgaaggcgtttgtggggaagatactgagggatt 778
||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttcgtgaaggcgtttgtggggaagatactgagggatt 38