Miyakogusa Predicted Gene
- Lj3g3v3338610.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3338610.1 Non Chatacterized Hit- tr|C5PD88|C5PD88_COCP7
Guanine nucleotide-binding protein beta subunit,
putat,25.51,0.0000007,WD_REPEATS_2,WD40 repeat;
WD_REPEATS_REGION,WD40-repeat-containing domain; no
description,WD40/YVTN ,CUFF.45664.1
(798 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59674 homologue to UniRef100_Q9SW94 Cluster: G protei... 850 0.0
gnl|LJGI|TC69772 similar to UniRef100_P93398 Cluster: Guanine nu... 779 0.0
gnl|LJGI|TC75008 similar to UniRef100_Q9SW94 Cluster: G protein ... 464 e-130
gnl|LJGI|CN825495 homologue to UniRef100_Q9SW94 Cluster: G prote... 297 5e-80
gnl|LJGI|BP031055 similar to UniRef100_A9UVX2 Cluster: Predicted... 64 1e-09
>gnl|LJGI|TC59674 homologue to UniRef100_Q9SW94 Cluster: G protein beta subunit; n=1;
Pisum sativum|Rep: G protein beta subunit - Pisum sativum
(Garden pea), complete
Length = 1960
Score = 850 bits (429), Expect = 0.0
Identities = 701/791 (88%), Gaps = 3/791 (0%)
Strand = Plus / Plus
Query: 1 atgagctgtgctttctcgccaactggtcagtctgttgcgtgcggtggtcttgacagtgtg 60
|||| |||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 560 atgacctgtgctttctcgccaactggtcaatctgttgcatgtggtggtcttgacagtgtt 619
Query: 61 tgctctattttcaatcttagttcccccactgataaggatggaaatgtacctgttacccgg 120
|| ||||| |||||||||| |||| ||||||| | |||||| ||| || |||| | |||
Sbjct: 620 tgttctatattcaatcttaattcctccactgacagggatgggaatctaaatgtttcgcgg 679
Query: 121 atgcttagcggacataaaggttatgtttcctcttgtcagtatgttccagatgaagccgct 180
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 680 atgcttagtggacataaaggttatgtttcctcttgtcagtatgttccggatgaagatact 739
Query: 181 cacttaatcactggttctggtgaccagacatgtgttttatgggatgttaccactggtctt 240
||| |||| |||||||||||||| || |||||||||||||||||| |||| ||||| |||
Sbjct: 740 cacctaattactggttctggtgatcaaacatgtgttttatgggatattactactggcctt 799
Query: 241 aaaacatctgtctttggaggtgaatttcagtctggccatgctgcagatgttcttagcatc 300
| ||||||||| ||||| ||||||||||||||||| ||| |||||||||| ||||||||
Sbjct: 800 agaacatctgtttttggcggtgaatttcagtctggacatactgcagatgtacttagcatt 859
Query: 301 tccattaatgggtccaactcaagaatgtttgcatctggttcttgtgatgcaactgctcga 360
||||| ||||| |||||||| |||||||||| |||||||||||| |||| |||||| ||
Sbjct: 860 tccatcaatggatccaactctagaatgtttgtatctggttcttgcgatggaactgcaaga 919
Query: 361 ttgtgggatactcgcgtggcaagtcgagcggtgcggacatttcatgggcatgagggagat 420
|||||||| ||||| |||||||||||||| |||| |||||||||||| |||||||| |||
Sbjct: 920 ttgtgggacactcgtgtggcaagtcgagcagtgcagacatttcatggacatgagggtgat 979
Query: 421 gttaatgccatcaagttcttcccagatggaaatagatttggaactggctcagaagatgga 480
|| ||| | |||| ||||| || ||||||||||||||||||||||||||||| |||||
Sbjct: 980 gtcaatactgtcaaattctttcctgatggaaatagatttggaactggctcagatgatggc 1039
Query: 481 acttgcagattgtttgacattaggactggacaccaacttcaagtgtattatcagcaacac 540
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 1040 acttgcagattgtttgacattaggactgggcaccaacttcaagtatattatcagcaacac 1099
Query: 541 ggtgac---gacatcccacctgtgacctcaattgcattctccatatcaggaagacttctt 597
||||| || ||||||| ||| ||||| || |||||||||||||| ||||||||||||
Sbjct: 1100 agtgacaatgaaatcccacatgtaacctccatggcattctccatatccggaagacttctt 1159
Query: 598 tttgctggatatgcaaatggagattgctatgtttgggacactttattggcaaaggtggtc 657
||||||||||| |||| || | ||||||||||||||||||||||||||||||||||||
Sbjct: 1160 tttgctggatacacaaacggcgcgtgctatgtttgggacactttattggcaaaggtggtc 1219
Query: 658 ttgaatataggatctctccaagactctcatgagggcaggatcagctgtttaggtttgtca 717
|||||| ||||||| || ||| |||||||||| || ||||||||||||||||||||||||
Sbjct: 1220 ttgaatctaggatcacttcaaaactctcatgatggaaggatcagctgtttaggtttgtca 1279
Query: 718 gctgatggaagcgccttgtgtacaggaggttgggacacaaacctgaagatatgggcattt 777
||||||||||| ||||| ||||||||| ||||||||||||| | ||||| |||||||||
Sbjct: 1280 gctgatggaagtgccttatgtacaggaagttgggacacaaatttaaagatttgggcattt 1339
Query: 778 ggagggcatag 788
|||||||||||
Sbjct: 1340 ggagggcatag 1350
>gnl|LJGI|TC69772 similar to UniRef100_P93398 Cluster: Guanine nucleotide-binding
protein subunit beta-2; n=1; Nicotiana tabacum|Rep:
Guanine nucleotide-binding protein subunit beta-2 -
Nicotiana tabacum (Common tobacco), partial (34%)
Length = 685
Score = 779 bits (393), Expect = 0.0
Identities = 393/393 (100%)
Strand = Plus / Plus
Query: 406 gggcatgagggagatgttaatgccatcaagttcttcccagatggaaatagatttggaact 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggcatgagggagatgttaatgccatcaagttcttcccagatggaaatagatttggaact 60
Query: 466 ggctcagaagatggaacttgcagattgtttgacattaggactggacaccaacttcaagtg 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggctcagaagatggaacttgcagattgtttgacattaggactggacaccaacttcaagtg 120
Query: 526 tattatcagcaacacggtgacgacatcccacctgtgacctcaattgcattctccatatca 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tattatcagcaacacggtgacgacatcccacctgtgacctcaattgcattctccatatca 180
Query: 586 ggaagacttctttttgctggatatgcaaatggagattgctatgtttgggacactttattg 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggaagacttctttttgctggatatgcaaatggagattgctatgtttgggacactttattg 240
Query: 646 gcaaaggtggtcttgaatataggatctctccaagactctcatgagggcaggatcagctgt 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcaaaggtggtcttgaatataggatctctccaagactctcatgagggcaggatcagctgt 300
Query: 706 ttaggtttgtcagctgatggaagcgccttgtgtacaggaggttgggacacaaacctgaag 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttaggtttgtcagctgatggaagcgccttgtgtacaggaggttgggacacaaacctgaag 360
Query: 766 atatgggcatttggagggcatagaagaacttga 798
|||||||||||||||||||||||||||||||||
Sbjct: 361 atatgggcatttggagggcatagaagaacttga 393
>gnl|LJGI|TC75008 similar to UniRef100_Q9SW94 Cluster: G protein beta subunit; n=1;
Pisum sativum|Rep: G protein beta subunit - Pisum
sativum (Garden pea), partial (50%)
Length = 767
Score = 464 bits (234), Expect = e-130
Identities = 234/234 (100%)
Strand = Plus / Plus
Query: 1 atgagctgtgctttctcgccaactggtcagtctgttgcgtgcggtggtcttgacagtgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 atgagctgtgctttctcgccaactggtcagtctgttgcgtgcggtggtcttgacagtgtg 593
Query: 61 tgctctattttcaatcttagttcccccactgataaggatggaaatgtacctgttacccgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tgctctattttcaatcttagttcccccactgataaggatggaaatgtacctgttacccgg 653
Query: 121 atgcttagcggacataaaggttatgtttcctcttgtcagtatgttccagatgaagccgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 atgcttagcggacataaaggttatgtttcctcttgtcagtatgttccagatgaagccgct 713
Query: 181 cacttaatcactggttctggtgaccagacatgtgttttatgggatgttaccact 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 cacttaatcactggttctggtgaccagacatgtgttttatgggatgttaccact 767
>gnl|LJGI|CN825495 homologue to UniRef100_Q9SW94 Cluster: G protein beta subunit; n=1;
Pisum sativum|Rep: G protein beta subunit - Pisum
sativum (Garden pea), partial (50%)
Length = 623
Score = 297 bits (150), Expect = 5e-80
Identities = 237/266 (89%)
Strand = Plus / Plus
Query: 121 atgcttagcggacataaaggttatgtttcctcttgtcagtatgttccagatgaagccgct 180
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 358 atgcttagtggacataaaggttatgtttcctcttgtcagtatgttccggatgaagatact 417
Query: 181 cacttaatcactggttctggtgaccagacatgtgttttatgggatgttaccactggtctt 240
||| |||| |||||||||||||| || |||||||||||||||||| |||| ||||| |||
Sbjct: 418 cacctaattactggttctggtgatcaaacatgtgttttatgggatattactactggcctt 477
Query: 241 aaaacatctgtctttggaggtgaatttcagtctggccatgctgcagatgttcttagcatc 300
| ||||||||| ||||| ||||||||||||||||| ||| |||||||||| ||||||||
Sbjct: 478 agaacatctgtttttggcggtgaatttcagtctggacatactgcagatgtacttagcatt 537
Query: 301 tccattaatgggtccaactcaagaatgtttgcatctggttcttgtgatgcaactgctcga 360
||||| ||||| |||||||| |||||||||| |||||||||||| |||| |||||| ||
Sbjct: 538 tccatcaatggatccaactctagaatgtttgtatctggttcttgcgatggaactgcaaga 597
Query: 361 ttgtgggatactcgcgtggcaagtcg 386
|||||||| ||||| |||||||||||
Sbjct: 598 ttgtgggacactcgtgtggcaagtcg 623
>gnl|LJGI|BP031055 similar to UniRef100_A9UVX2 Cluster: Predicted protein; n=1;
Monosiga brevicollis MX1|Rep: Predicted protein -
Monosiga, partial (3%)
Length = 368
Score = 63.9 bits (32), Expect = 1e-09
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 767 tatgggcatttggagggcatagaagaacttga 798
||||||||||||||||||||||||||||||||
Sbjct: 368 tatgggcatttggagggcatagaagaacttga 337