Miyakogusa Predicted Gene

Lj3g3v3338520.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3338520.1 Non Chatacterized Hit- tr|I3STE5|I3STE5_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,84.98,0,BURP,BURP domain; no description,BURP domain; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.45892.1
         (639 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO024824 similar to UniRef100_A7P936 Cluster: Chromosom...   963   0.0  
gnl|LJGI|TC69031 similar to UniRef100_A7P936 Cluster: Chromosome...   529   e-150
gnl|LJGI|AV408300 similar to UniRef100_A7P936 Cluster: Chromosom...   180   7e-45
gnl|LJGI|TC66578 weakly similar to UniRef100_A7P936 Cluster: Chr...    54   1e-06

>gnl|LJGI|GO024824 similar to UniRef100_A7P936 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (56%)
          Length = 676

 Score =  963 bits (486), Expect = 0.0
 Identities = 486/486 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtgttcttcaccttaaaagacttgaaggttgggaaaagaatgccaatttatttcccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 atggtgttcttcaccttaaaagacttgaaggttgggaaaagaatgccaatttatttcccc 250

                                                                       
Query: 61  aaaagagaccctgcaacttcccctaagttctggccaagagaaaaagcagattcagttcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aaaagagaccctgcaacttcccctaagttctggccaagagaaaaagcagattcagttcct 310

                                                                       
Query: 121 ttctcactgaaccaactaccaaaccttctcaattttttctctttctctccagattctcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ttctcactgaaccaactaccaaaccttctcaattttttctctttctctccagattctcct 370

                                                                       
Query: 181 ccagccaaagccatggaagataccctgaaggaatgcgagagcaaacccatccaaggtgag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ccagccaaagccatggaagataccctgaaggaatgcgagagcaaacccatccaaggtgag 430

                                                                       
Query: 241 gtaaaattctgtgctacctctttagaatccatgcttgacttcactcatagcattcttggg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gtaaaattctgtgctacctctttagaatccatgcttgacttcactcatagcattcttggg 490

                                                                       
Query: 301 ttggaatctgatgatcttcaagtatttgctacttcacacctaaccaaatccagtgtcact 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ttggaatctgatgatcttcaagtatttgctacttcacacctaaccaaatccagtgtcact 550

                                                                       
Query: 361 ttccagaactacactatcttagaaaacatcatgagaatctcagctcctaagatggtggct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ttccagaactacactatcttagaaaacatcatgagaatctcagctcctaagatggtggct 610

                                                                       
Query: 421 tgtcacaccatgccttacccttatgctgttttttactgccacagccaagagagtgagaac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tgtcacaccatgccttacccttatgctgttttttactgccacagccaagagagtgagaac 670

                 
Query: 481 agggta 486
           ||||||
Sbjct: 671 agggta 676


>gnl|LJGI|TC69031 similar to UniRef100_A7P936 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (63%)
          Length = 1161

 Score =  529 bits (267), Expect = e-150
 Identities = 273/275 (99%)
 Strand = Plus / Plus

                                                                       
Query: 365 agaactacactatcttagaaaacatcatgagaatctcagctcctaagatggtggcttgtc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agaactacactatcttagaaaacatcatgagaatctcagctcctaagatggtggcttgtc 504

                                                                       
Query: 425 acaccatgccttacccttatgctgttttttactgccacagccaagagagtgagaacaggg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acaccatgccttacccttatgctgttttttactgccacagccaagagagtgagaacaggg 564

                                                                       
Query: 485 tatataaggtttcacttgttggtgataatggggataaggtggaagctatggttgtttgtc 544
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tatataatgtttcacttgttggtgataatggggataaggtggaagctatggttgtttgtc 624

                                                                       
Query: 545 atttggatacctctcactggggttctggtcatgtttcttttcaaattcttggggttacac 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atttggatacctctcactggggttctggtcatgtttcttttcaaattcttggggttacac 684

                                              
Query: 605 ctggaagctcttctgtgtgccactttttcccagca 639
           |||||||||| ||||||||||||||||||||||||
Sbjct: 685 ctggaagctcgtctgtgtgccactttttcccagca 719



 Score =  476 bits (240), Expect = e-134
 Identities = 240/240 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtgttcttcaccttaaaagacttgaaggttgggaaaagaatgccaatttatttcccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 atggtgttcttcaccttaaaagacttgaaggttgggaaaagaatgccaatttatttcccc 266

                                                                       
Query: 61  aaaagagaccctgcaacttcccctaagttctggccaagagaaaaagcagattcagttcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aaaagagaccctgcaacttcccctaagttctggccaagagaaaaagcagattcagttcct 326

                                                                       
Query: 121 ttctcactgaaccaactaccaaaccttctcaattttttctctttctctccagattctcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttctcactgaaccaactaccaaaccttctcaattttttctctttctctccagattctcct 386

                                                                       
Query: 181 ccagccaaagccatggaagataccctgaaggaatgcgagagcaaacccatccaaggtgag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ccagccaaagccatggaagataccctgaaggaatgcgagagcaaacccatccaaggtgag 446


>gnl|LJGI|AV408300 similar to UniRef100_A7P936 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 419

 Score =  180 bits (91), Expect = 7e-45
 Identities = 91/91 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtgttcttcaccttaaaagacttgaaggttgggaaaagaatgccaatttatttcccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 atggtgttcttcaccttaaaagacttgaaggttgggaaaagaatgccaatttatttcccc 388

                                          
Query: 61  aaaagagaccctgcaacttcccctaagttct 91
           |||||||||||||||||||||||||||||||
Sbjct: 389 aaaagagaccctgcaacttcccctaagttct 419


>gnl|LJGI|TC66578 weakly similar to UniRef100_A7P936 Cluster: Chromosome chr3
           scaffold_8, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr3 scaffold_8, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (73%)
          Length = 1442

 Score = 54.0 bits (27), Expect = 1e-06
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 18  aaaagacttgaaggttgggaaaagaatgccaatttattt 56
           |||||| || ||||||||||||| |||||||||||||||
Sbjct: 475 aaaagatttaaaggttgggaaaaaaatgccaatttattt 513