Miyakogusa Predicted Gene
- Lj3g3v3338450.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3338450.1 tr|I3SZ96|I3SZ96_LOTJA ATP-dependent Clp protease
proteolytic subunit OS=Lotus japonicus GN=clpP PE=,97.82,0,ClpP,ClpP;
CLP_protease,ClpP/TepA; CLP_PROTEASE_HIS,ClpP, active site;
ATP-DEPENDENT CLP PROTEASE PR,CUFF.45658.1
(828 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59986 similar to UniRef100_O49081 Cluster: ATP-depend... 1641 0.0
gnl|LJGI|AV779444 similar to UniRef100_Q9SAA2 Cluster: ATP-depen... 460 e-129
>gnl|LJGI|TC59986 similar to UniRef100_O49081 Cluster: ATP-dependent Clp protease
proteolytic subunit; n=1; Fritillaria agrestis|Rep:
ATP-dependent Clp protease proteolytic subunit -
Fritillaria agrestis (Stinkbells), partial (74%)
Length = 1181
Score = 1641 bits (828), Expect = 0.0
Identities = 828/828 (100%)
Strand = Plus / Plus
Query: 1 atggcagctcaagctgtgtcagtgcctgcgactgcaaccttctctatcgcttctcgccgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 atggcagctcaagctgtgtcagtgcctgcgactgcaaccttctctatcgcttctcgccgg 95
Query: 61 aacactccgtcacaccttgcgttttctcacagaaatctatgccagatagcttctaacttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 aacactccgtcacaccttgcgttttctcacagaaatctatgccagatagcttctaacttg 155
Query: 121 tcaagcccctatggtggtcattcatcgaaatttgggttatcaagtaaaagccctggcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 tcaagcccctatggtggtcattcatcgaaatttgggttatcaagtaaaagccctggcttt 215
Query: 181 cctttaaagcttgatgagaaaaatacctatgatgctagtacaagttacggtgcaattgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 cctttaaagcttgatgagaaaaatacctatgatgctagtacaagttacggtgcaattgaa 275
Query: 241 gccaagaaggggaacccaccaataacaccagcagtgatgactcctggaggacctcttgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gccaagaaggggaacccaccaataacaccagcagtgatgactcctggaggacctcttgat 335
Query: 301 ctctcgtctgttttgttcaggaatcgtataatattcataggacagccagttaacgcacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ctctcgtctgttttgttcaggaatcgtataatattcataggacagccagttaacgcacaa 395
Query: 361 gtggctcagagagttatatcgcagcttgtgactctggctactattgatccaaatgcagac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gtggctcagagagttatatcgcagcttgtgactctggctactattgatccaaatgcagac 455
Query: 421 atactgatgtatatcaattgccctggtggaagcacatattcagtattggcaatttatgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 atactgatgtatatcaattgccctggtggaagcacatattcagtattggcaatttatgat 515
Query: 481 tgcatgtcttggataaagcccaaggttggtacagtatgtttcggagtagcggcaagccaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tgcatgtcttggataaagcccaaggttggtacagtatgtttcggagtagcggcaagccaa 575
Query: 541 ggagcacttctccttgctggtggggagaagggaatgcgctattcaatgccaaattcccgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ggagcacttctccttgctggtggggagaagggaatgcgctattcaatgccaaattcccgc 635
Query: 601 ataatgatacatcaaccccagagtggatgtgggggtcatgttgaggatgtaagacgccaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 ataatgatacatcaaccccagagtggatgtgggggtcatgttgaggatgtaagacgccaa 695
Query: 661 gtgaatgaagctgtgcaatctcgccataaaattgacaagatgtatagtgctttcaccgga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gtgaatgaagctgtgcaatctcgccataaaattgacaagatgtatagtgctttcaccgga 755
Query: 721 cagccaatcgagaaggtgcaacagtacacagagagggaccgttttctttctgtttctgag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 cagccaatcgagaaggtgcaacagtacacagagagggaccgttttctttctgtttctgag 815
Query: 781 gctttggagtttggtcttattgatggtgtactggaaacagagtattga 828
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 gctttggagtttggtcttattgatggtgtactggaaacagagtattga 863
>gnl|LJGI|AV779444 similar to UniRef100_Q9SAA2 Cluster: ATP-dependent Clp protease
proteolytic subunit 6, chloroplast precursor; n=1;
Arabidopsis thaliana|Rep: ATP-dependent Clp protease
proteolytic subunit 6, chloroplast precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (32%)
Length = 539
Score = 460 bits (232), Expect = e-129
Identities = 260/268 (97%), Gaps = 1/268 (0%)
Strand = Plus / Minus
Query: 562 ggggagaagggaatgcgctattcaatgccaaattcccgcataatgatacatcaaccccag 621
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 539 ggggagaagggaatgcgctattcaatgccaaattcccgcataatgatacatcgacccccg 480
Query: 622 agtggatgtgggggtcatgttgaggatgtaagacgccaagtgaatgaagctgtgcaatct 681
| |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 479 actggatgtgggggtcatgttgaggatgtaagacgccaagtgcatgaagctgtgccatct 420
Query: 682 cgccataaaattgacaagatg-tatagtgctttcaccggacagccaatcgagaaggtgca 740
||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 419 cgccatacaattgacaagatgctatagtgctttcaccggacagcccatcgagaaggtgca 360
Query: 741 acagtacacagagagggaccgttttctttctgtttctgaggctttggagtttggtcttat 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 acagtacacagagagggaccgttttctttctgtttctgaggctttggagtttggtcttat 300
Query: 801 tgatggtgtactggaaacagagtattga 828
||||||||||||||||||||||||||||
Sbjct: 299 tgatggtgtactggaaacagagtattga 272