Miyakogusa Predicted Gene
- Lj3g3v3338400.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3338400.1 Non Chatacterized Hit- tr|D8UEP6|D8UEP6_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,33.16,3e-18,coiled-coil,NULL; UNCHARACTERIZED,NULL;
RETICULON,Reticulon; Nucleotide-diphospho-sugar
transferases,CUFF.45653.1
(1302 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62111 similar to UniRef100_A7NTG5 Cluster: Chromosome... 2581 0.0
gnl|LJGI|GO021194 similar to UniRef100_Q9LN62 Cluster: F18O14.8;... 601 e-171
gnl|LJGI|TC63973 similar to UniRef100_A7NTG5 Cluster: Chromosome... 188 6e-47
gnl|LJGI|TC59981 similar to UniRef100_A7NTG5 Cluster: Chromosome... 82 1e-14
>gnl|LJGI|TC62111 similar to UniRef100_A7NTG5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 1751
Score = 2581 bits (1302), Expect = 0.0
Identities = 1302/1302 (100%)
Strand = Plus / Plus
Query: 1 atgattgggcgcagagagcgagaaggaccattgatgaggaacaacagcgcccattcccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 atgattgggcgcagagagcgagaaggaccattgatgaggaacaacagcgcccattcccta 272
Query: 61 cgcaaatcaaaggtcctaaccgccgtggcaattgggatccttattggatgcatcctcgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cgcaaatcaaaggtcctaaccgccgtggcaattgggatccttattggatgcatcctcgct 332
Query: 121 ttcctcttcccaaatgggttcttcatttctgattctgtgaccccaaatcgccctcacacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ttcctcttcccaaatgggttcttcatttctgattctgtgaccccaaatcgccctcacacc 392
Query: 181 ggatccaagacccaggaaaattcagctggatgtgaatcttcagatcgggtcaacatgtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ggatccaagacccaggaaaattcagctggatgtgaatcttcagatcgggtcaacatgtta 452
Query: 241 aaatcagagtttgtgtcagtatcagatagaaacgctcagcttaagaaacaggtgagggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 aaatcagagtttgtgtcagtatcagatagaaacgctcagcttaagaaacaggtgagggaa 512
Query: 301 ttgactgaaaggcttcggctcgcagaacaagggaaagaccatgctcaaaagcagtttctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ttgactgaaaggcttcggctcgcagaacaagggaaagaccatgctcaaaagcagtttctt 572
Query: 361 gcattgggtaaacagcacaaagctggaccatttggcactgtcaagggattaagaaccagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gcattgggtaaacagcacaaagctggaccatttggcactgtcaagggattaagaaccagc 632
Query: 421 cctactgttgttcctgatgaatctgtgaacccaaggttggcaaagatattggagaaagtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 cctactgttgttcctgatgaatctgtgaacccaaggttggcaaagatattggagaaagtc 692
Query: 481 gcagttaaccgagagcttatagttgcacttgccaacaccaacgtgaaggagatgttagag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 gcagttaaccgagagcttatagttgcacttgccaacaccaacgtgaaggagatgttagag 752
Query: 541 gtctggttcaccaacatcaagaaagttggtatacctaattatctagttgttgctttagat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 gtctggttcaccaacatcaagaaagttggtatacctaattatctagttgttgctttagat 812
Query: 601 gataacattgcagagttttgtgaatcaaatcaagttccagtttacaagagagacccagat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 gataacattgcagagttttgtgaatcaaatcaagttccagtttacaagagagacccagat 872
Query: 661 gatggtattgactccattgggaaagaaggagggaaccatgctgtctctgggcttaaattt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 gatggtattgactccattgggaaagaaggagggaaccatgctgtctctgggcttaaattt 932
Query: 721 catattctcagagaatttttgcagctgggatatagtgttcttctatcagatgttgacatt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 catattctcagagaatttttgcagctgggatatagtgttcttctatcagatgttgacatt 992
Query: 781 gtgtatttgcagaatccttttgatcatctataccgggattcagatgtggagtccatgagt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993 gtgtatttgcagaatccttttgatcatctataccgggattcagatgtggagtccatgagt 1052
Query: 841 gatggacatgataacaatacagcttatggctataacgatgtctttgatgaacctgcgatg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 gatggacatgataacaatacagcttatggctataacgatgtctttgatgaacctgcgatg 1112
Query: 901 ggttgggctcgatatgctcataccatgaggatatgggtttacaactctggtttcttctat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 ggttgggctcgatatgctcataccatgaggatatgggtttacaactctggtttcttctat 1172
Query: 961 atcagaccaaccatcccttccattgagcttttggatcgcgtggcaacgagactttcgaag 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 atcagaccaaccatcccttccattgagcttttggatcgcgtggcaacgagactttcgaag 1232
Query: 1021 gagaaagcgtgggatcaggccgttttcaacgaggaactcttttacccctcgcacccgggt 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1233 gagaaagcgtgggatcaggccgttttcaacgaggaactcttttacccctcgcacccgggt 1292
Query: 1081 tatgatggacttcatgctgccagaagaaccatggatatgtatctcttcatgaacagcaag 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1293 tatgatggacttcatgctgccagaagaaccatggatatgtatctcttcatgaacagcaag 1352
Query: 1141 gttctgttcaagacagtgaggaatgatgctaacctcagcaaattgaaaccagtgatcatt 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1353 gttctgttcaagacagtgaggaatgatgctaacctcagcaaattgaaaccagtgatcatt 1412
Query: 1201 cacgtgaattaccaccctgataagcttccacgaatgaaagcagttgttgaatattatgtt 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1413 cacgtgaattaccaccctgataagcttccacgaatgaaagcagttgttgaatattatgtt 1472
Query: 1261 aatgggaaactggatgctctcaaacctttccctgaaggctca 1302
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1473 aatgggaaactggatgctctcaaacctttccctgaaggctca 1514
>gnl|LJGI|GO021194 similar to UniRef100_Q9LN62 Cluster: F18O14.8; n=1; Arabidopsis
thaliana|Rep: F18O14.8 - Arabidopsis thaliana (Mouse-ear
cress), partial (8%)
Length = 618
Score = 601 bits (303), Expect = e-171
Identities = 309/311 (99%)
Strand = Plus / Plus
Query: 1 atgattgggcgcagagagcgagaaggaccattgatgaggaacaacagcgcccattcccta 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 305 atgattgggcgcagagagcgagaaggaccattgatgaggagcaacagcgcccattcccta 364
Query: 61 cgcaaatcaaaggtcctaaccgccgtggcaattgggatccttattggatgcatcctcgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cgcaaatcaaaggtcctaaccgccgtggcaattgggatccttattggatgcatcctcgct 424
Query: 121 ttcctcttcccaaatgggttcttcatttctgattctgtgaccccaaatcgccctcacacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ttcctcttcccaaatgggttcttcatttctgattctgtgaccccaaatcgccctcacacc 484
Query: 181 ggatccaagacccaggaaaattcagctggatgtgaatcttcagatcgggtcaacatgtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ggatccaagacccaggaaaattcagctggatgtgaatcttcagatcgggtcaacatgtta 544
Query: 241 aaatcagagtttgtgtcagtatcagatagaaacgctcagcttaagaaacaggtgagggaa 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aagtcagagtttgtgtcagtatcagatagaaacgctcagcttaagaaacaggtgagggaa 604
Query: 301 ttgactgaaag 311
|||||||||||
Sbjct: 605 ttgactgaaag 615
>gnl|LJGI|TC63973 similar to UniRef100_A7NTG5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 716
Score = 188 bits (95), Expect = 6e-47
Identities = 277/337 (82%), Gaps = 3/337 (0%)
Strand = Plus / Plus
Query: 861 agcttatggctataacgatgtctttgatgaacctgcgatgggttgggctcgatatgctca 920
||||||||| | ||| |||||||||||||| ||| | ||||| |||||| ||||||||||
Sbjct: 1 agcttatggttttaatgatgtctttgatgagccttcaatggggtgggctagatatgctca 60
Query: 921 taccatgaggatatgggtttacaactctggtttcttctatatcagaccaaccatcccttc 980
||||||||| ||||||||||| |||||||||||||| || || || || || | |||||
Sbjct: 61 taccatgagaatatgggtttataactctggtttcttttacataaggcctactcttccttc 120
Query: 981 cattgagcttttggatcgcgtggcaacgagactttcgaaggag---aaagcgtgggatca 1037
|||||||| |||||||| || || | | ||||| | ||| ||||||||||||||
Sbjct: 121 gattgagctcttggatcgtgttgctagccgtctttctacggattcaaaagcgtgggatca 180
Query: 1038 ggccgttttcaacgaggaactcttttacccctcgcacccgggttatgatggacttcatgc 1097
||| ||||| || || || || |||| ||| || || |||||||||||||||||||||||
Sbjct: 181 ggctgtttttaatgaagagctgtttttcccttcacatccgggttatgatggacttcatgc 240
Query: 1098 tgccagaagaaccatggatatgtatctcttcatgaacagcaaggttctgttcaagacagt 1157
||| | ||| || ||||||||||| || || ||||||||||||||||| || ||||| ||
Sbjct: 241 tgcaaaaaggacaatggatatgtacctttttatgaacagcaaggttctctttaagactgt 300
Query: 1158 gaggaatgatgctaacctcagcaaattgaaaccagtg 1194
||||| |||||||| |||| || ||||| ||||||
Sbjct: 301 aaggaaagatgctaagctcaagaagttgaagccagtg 337
>gnl|LJGI|TC59981 similar to UniRef100_A7NTG5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 854
Score = 81.8 bits (41), Expect = 1e-14
Identities = 95/113 (84%)
Strand = Plus / Plus
Query: 508 cttgccaacaccaacgtgaaggagatgttagaggtctggttcaccaacatcaagaaagtt 567
||||| ||||| || |||| ||||||||| ||||| ||||||||||| ||||||| |||
Sbjct: 595 cttgctaacactaatgtgatggagatgttggaggtgtggttcaccaatatcaagagggtt 654
Query: 568 ggtatacctaattatctagttgttgctttagatgataacattgcagagttttg 620
|| ||||||||||| | |||||||| || |||||||| |||| ||||||||
Sbjct: 655 ggcatacctaattacttggttgttgcattggatgataaaattgaggagttttg 707