Miyakogusa Predicted Gene
- Lj3g3v3338150.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3338150.1 tr|G7KP90|G7KP90_MEDTR F-box/kelch-repeat protein
OS=Medicago truncatula GN=MTR_6g065510 PE=4
SV=1,38.51,2e-19,FBA_1,F-box associated domain, type 1,86149_g.1
(465 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59517 weakly similar to UniRef100_Q2HRF5 Cluster: Cyc... 922 0.0
gnl|LJGI|CB826878 similar to UniRef100_Q9BKD3 Cluster: TSO45-4B;... 76 2e-13
gnl|LJGI|GO035798 weakly similar to UniRef100_Q12X80 Cluster: 4F... 74 8e-13
gnl|LJGI|TC78617 similar to UniRef100_A2Q4Y0 Cluster: F-box prot... 72 3e-12
>gnl|LJGI|TC59517 weakly similar to UniRef100_Q2HRF5 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (42%)
Length = 1382
Score = 922 bits (465), Expect = 0.0
Identities = 465/465 (100%)
Strand = Plus / Plus
Query: 1 atgtacagtgctactgaagaaataaaccctgatccatacttaattttttcgtttgatttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 atgtacagtgctactgaagaaataaaccctgatccatacttaattttttcgtttgatttg 750
Query: 61 gggaaagaaaacaatgcacaactgtcattgccttatagtgctcgacgcagatatgaaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 gggaaagaaaacaatgcacaactgtcattgccttatagtgctcgacgcagatatgaaatc 810
Query: 121 cccgattttaggccaaatcttggggttttggaaggttgcctatgtttttgtcacactaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 cccgattttaggccaaatcttggggttttggaaggttgcctatgtttttgtcacactaac 870
Query: 181 aagaaatctcattttgcgatttggcaaatgaaagagtttggagtgcacaattcttggact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 aagaaatctcattttgcgatttggcaaatgaaagagtttggagtgcacaattcttggact 930
Query: 241 cagttgtttaaaattactactggctatgaaagtatcattgacagtattttaagctggccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 cagttgtttaaaattactactggctatgaaagtatcattgacagtattttaagctggccc 990
Query: 301 tgttttgcaatgtacttgtctgagaagggctatatcctgttgtcaaaacggggtttgttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 991 tgttttgcaatgtacttgtctgagaagggctatatcctgttgtcaaaacggggtttgttc 1050
Query: 361 caatgtcgagcagttctctatacccagaaagacaataaattacaaggtacaaatattgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1051 caatgtcgagcagttctctatacccagaaagacaataaattacaaggtacaaatattgct 1110
Query: 421 tgctgtgccaataattacattgaaagcttggtttctccttgttga 465
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1111 tgctgtgccaataattacattgaaagcttggtttctccttgttga 1155
>gnl|LJGI|CB826878 similar to UniRef100_Q9BKD3 Cluster: TSO45-4B; n=1; Taenia
solium|Rep: TSO45-4B - Taenia solium (Pork tapeworm),
partial (5%)
Length = 635
Score = 75.8 bits (38), Expect = 2e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 191 attttgcgatttggcaaatgaaagagtttggagtgcacaattcttggactcagttgtt 248
|||||| | ||||||||||||| ||||||||||||||||| || ||||||||||||||
Sbjct: 445 attttgtggtttggcaaatgaaggagtttggagtgcacaagtcatggactcagttgtt 502
>gnl|LJGI|GO035798 weakly similar to UniRef100_Q12X80 Cluster: 4Fe-4S ferredoxin,
iron-sulfur binding; n=1; Methanococcoides burtonii DSM
6242|Rep: 4Fe-4S ferredoxin, iron-sulfur binding -
Methanococcoides burtonii (strain DSM 6242), partial
(10%)
Length = 581
Score = 73.8 bits (37), Expect = 8e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 200 tttggcaaatgaaagagtttggagtgcacaattcttggactcagttgtt 248
||||||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 79 tttggcaaatgaaggagtttggagtacacaagtcttggactcagttgtt 127
>gnl|LJGI|TC78617 similar to UniRef100_A2Q4Y0 Cluster: F-box protein interaction
domain; n=1; Medicago truncatula|Rep: F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (8%)
Length = 518
Score = 71.9 bits (36), Expect = 3e-12
Identities = 98/118 (83%), Gaps = 3/118 (2%)
Strand = Plus / Plus
Query: 142 ggggttttggaaggttgcctatgtttttgtcacactaacaagaaatctcat---tttgcg 198
|||||||||| ||| ||||||||| ||| ||| | ||||||| || | ||| |||| |
Sbjct: 1 ggggttttgggaggatgcctatgtatttctcaaaataacaaggaaacgcatagttttgtg 60
Query: 199 atttggcaaatgaaagagtttggagtgcacaattcttggactcagttgtttaaaatta 256
| ||||||||||| ||||||||||||||| | ||||||||||| |||||||| ||||
Sbjct: 61 gtatggcaaatgaaggagtttggagtgcacgagtcttggactcaattgtttaacatta 118