Miyakogusa Predicted Gene

Lj3g3v3337970.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3337970.1 Non Chatacterized Hit- tr|C6T5C3|C6T5C3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23630
PE,40.4,2e-19,DUF588,Uncharacterised protein family UPF0497,
trans-membrane plant; seg,NULL; SUBFAMILY NOT NAMED,N,CUFF.45630.1
         (462 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO007891 similar to UniRef100_A7P967 Cluster: Chromosom...   291   2e-78
gnl|LJGI|TC72857 similar to UniRef100_A7P967 Cluster: Chromosome...   202   1e-51
gnl|LJGI|TC80619 similar to UniRef100_Q75K99 Cluster: Expressed ...    74   8e-13
gnl|LJGI|TC59834 similar to UniRef100_A7R353 Cluster: Chromosome...    60   1e-08

>gnl|LJGI|GO007891 similar to UniRef100_A7P967 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (31%)
          Length = 737

 Score =  291 bits (147), Expect = 2e-78
 Identities = 157/159 (98%), Gaps = 1/159 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatgaatttcctggctcagtaggcaccagcgccagcttgagcctgagattaggccag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 atggatgaatttcctggctcagtaggcaccagcgccagcttgagcctgagattaggccag 634

                                                                       
Query: 61  accatatgctcatctgcctcacttcttttcatgtctttgggagttgaattctacagctac 120
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 accatatactcatctgcctcacttcttttcatgtctttgggagttgaattctacagctac 694

                                                  
Query: 121 acatccttctgctttctggtaacaattatgggtttggta 159
           |||||||||||||||||||| ||||||||||||||||||
Sbjct: 695 acatccttctgctttctggt-acaattatgggtttggta 732


>gnl|LJGI|TC72857 similar to UniRef100_A7P967 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (22%)
          Length = 763

 Score =  202 bits (102), Expect = 1e-51
 Identities = 105/106 (99%)
 Strand = Plus / Minus

                                                                       
Query: 357 gttttgctgcaggtacaggatatctgcagttatggccttcctgacatggtctctatcttt 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 gttttgctgcaggtacaggatatctgcagttatggccttcctgacatggtctctatcttt 704

                                                         
Query: 417 ggcatcctctctttttaacctttggctattaccctctttgtgattc 462
           ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 703 ggcatcccctctttttaacctttggctattaccctctttgtgattc 658


>gnl|LJGI|TC80619 similar to UniRef100_Q75K99 Cluster: Expressed protein; n=1; Oryza
           sativa Japonica Group|Rep: Expressed protein - Oryza
           sativa subsp. japonica (Rice), partial (20%)
          Length = 711

 Score = 73.8 bits (37), Expect = 8e-13
 Identities = 82/97 (84%), Gaps = 5/97 (5%)
 Strand = Plus / Minus

                                                                       
Query: 163 ccttggagtttcacgttagcagtggttgatgggtactcaactctggtaaaa-----tgcc 217
           ||||||||| |||| |||||| ||||||||  ||||||| |||||||||||     ||||
Sbjct: 178 ccttggagtgtcacattagcattggttgatttgtactcagctctggtaaaaaaaaatgcc 119

                                                
Query: 218 ccgttcgtcaaccaggaatactgttgattatcattgt 254
            | | |||||||||||||||| |||||||||||||||
Sbjct: 118 gcatccgtcaaccaggaataccgttgattatcattgt 82



 Score = 63.9 bits (32), Expect = 8e-10
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 80  cacttcttttcatgtctttgggagttgaattctacagctacaca 123
           ||||| ||||||||||| ||||||||||||||||||| ||||||
Sbjct: 358 cacttgttttcatgtctgtgggagttgaattctacagatacaca 315


>gnl|LJGI|TC59834 similar to UniRef100_A7R353 Cluster: Chromosome undetermined
           scaffold_484, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_484,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           complete
          Length = 755

 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                       
Query: 76  gcctcacttcttttcatgtctttgggagttgaattctacagctacacatccttctgcttt 135
           ||||| ||||| |||||||  ||||| ||||| |||||| |||||||  | |||||||||
Sbjct: 229 gcctcccttctcttcatgtgcttgggcgttgatttctacggctacactgctttctgcttt 288

                                     
Query: 136 ctggtaacaattatgggtttggtaat 161
            |||| ||| | ||||||||||||||
Sbjct: 289 ttggtgacagtcatgggtttggtaat 314