Miyakogusa Predicted Gene
- Lj3g3v3337420.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3337420.1 Non Chatacterized Hit- tr|I1LQ89|I1LQ89_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,70.79,0,G
protein alpha subunit,Guanine nucleotide binding protein (G-protein),
alpha subunit; XLG (EXTRA-LA,CUFF.45611.1
(2592 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS355437 similar to UniRef100_A7P979 Cluster: Chromosom... 1227 0.0
gnl|LJGI|FS329124 similar to UniRef100_Q50E33 Cluster: Prokineti... 1043 0.0
gnl|LJGI|TC66302 74 5e-12
gnl|LJGI|TC74866 similar to UniRef100_A7R2S0 Cluster: Chromosome... 70 8e-11
gnl|LJGI|TC63677 weakly similar to UniRef100_A9V608 Cluster: Pre... 60 7e-08
gnl|LJGI|BP063658 weakly similar to UniRef100_A7P979 Cluster: Ch... 58 3e-07
>gnl|LJGI|FS355437 similar to UniRef100_A7P979 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (14%)
Length = 619
Score = 1227 bits (619), Expect = 0.0
Identities = 619/619 (100%)
Strand = Plus / Minus
Query: 1129 aagtgggcaggagtacaatgtgaaggaacaactgatttttggttgagtcctgatggatca 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aagtgggcaggagtacaatgtgaaggaacaactgatttttggttgagtcctgatggatca 560
Query: 1189 tacatggaagtgggacagaagaatgtcaaaggtcgtatatgggataagcctacagtgaag 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tacatggaagtgggacagaagaatgtcaaaggtcgtatatgggataagcctacagtgaag 500
Query: 1249 ctagcttctgtaattctgtcactgcctgttcctcgtagctctgtgacctctggtggtgaa 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ctagcttctgtaattctgtcactgcctgttcctcgtagctctgtgacctctggtggtgaa 440
Query: 1309 ggacaaactaaagttagcccacataatcttcaacagaaaatgctttacaaatttctactt 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ggacaaactaaagttagcccacataatcttcaacagaaaatgctttacaaatttctactt 380
Query: 1369 gttggttctgtcaagtcaggaacatgtactatattcaaacaggccaagcttctgtacaat 1428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gttggttctgtcaagtcaggaacatgtactatattcaaacaggccaagcttctgtacaat 320
Query: 1429 gttcctttctctgaaaatgagcgccaaagtatcaagttggtgatccaaagcaacttgtat 1488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gttcctttctctgaaaatgagcgccaaagtatcaagttggtgatccaaagcaacttgtat 260
Query: 1489 aggtacattggtatcctgctggaggcgcgagaattttttgaggagagtttgtgcgaaaac 1548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aggtacattggtatcctgctggaggcgcgagaattttttgaggagagtttgtgcgaaaac 200
Query: 1549 tggaacaaacggcttgttgatgaatcaacttcatccgggaatactggcgaggttattgac 1608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 tggaacaaacggcttgttgatgaatcaacttcatccgggaatactggcgaggttattgac 140
Query: 1609 acaacaatctattccattggtccaaaactgaaatctttctcagattggctactccaatac 1668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 acaacaatctattccattggtccaaaactgaaatctttctcagattggctactccaatac 80
Query: 1669 acagtgtcaggtaatttggatgcaatatttccagctgctgcacgtgagtatgcaccactg 1728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 acagtgtcaggtaatttggatgcaatatttccagctgctgcacgtgagtatgcaccactg 20
Query: 1729 gtggaggagttgtggaggg 1747
|||||||||||||||||||
Sbjct: 19 gtggaggagttgtggaggg 1
>gnl|LJGI|FS329124 similar to UniRef100_Q50E33 Cluster: Prokineticin 2 variant
1S/2/3/4; n=1; Arvicanthis niloticus|Rep: Prokineticin 2
variant 1S/2/3/4 - Arvicanthis niloticus (African grass
rat), partial (12%)
Length = 675
Score = 1043 bits (526), Expect = 0.0
Identities = 529/530 (99%)
Strand = Plus / Plus
Query: 1 atggcttcacttctgaaaaaactgcgacctggtgttgtgcctgcaattcatgatgatagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 atggcttcacttctgaaaaaactgcgacctggtgttgtgcctgcaattcatgatgatagt 205
Query: 61 ggtgattttagctatgagtactcctttgcagaggagtacaaaggccctcctatcagatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggtgattttagctatgagtactcctttgcagaggagtacaaaggccctcctatcagatac 265
Query: 121 tccattcctgaagcacctcctttcaaccttgataaaatcccacttgctcctcttgctcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tccattcctgaagcacctcctttcaaccttgataaaatcccacttgctcctcttgctcct 325
Query: 181 tctccccctcttgatcactcctcactcccaattatccaacctttcagaaaaaccaatgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tctccccctcttgatcactcctcactcccaattatccaacctttcagaaaaaccaatgct 385
Query: 241 agtagtacaaatcccaaactccctatagttcctcttcctgatcttgaagttgaacaagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 agtagtacaaatcccaaactccctatagttcctcttcctgatcttgaagttgaacaagag 445
Query: 301 acaggatttcatgtttttattccaagtaattctgacacaacacaatcaggttcaacatca 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 acagggtttcatgtttttattccaagtaattctgacacaacacaatcaggttcaacatca 505
Query: 361 agctttagtcctgtttcttgtgagatagttccatgcatggaagatgattgtgaaaatatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 agctttagtcctgtttcttgtgagatagttccatgcatggaagatgattgtgaaaatatc 565
Query: 421 ccagctactccaagacatgtcagaaggccttcagctgtgacttttcgtgagcctcagtca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ccagctactccaagacatgtcagaaggccttcagctgtgacttttcgtgagcctcagtca 625
Query: 481 aatgacatggtggatgatgaagagtttgttgattctcaaggtgggggatt 530
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 aatgacatggtggatgatgaagagtttgttgattctcaaggtgggggatt 675
>gnl|LJGI|TC66302
Length = 832
Score = 73.8 bits (37), Expect = 5e-12
Identities = 118/145 (81%)
Strand = Plus / Plus
Query: 2385 tgctgtcaagtttaagagattgttccattcccttaccgatcgaaagctgtttgtttcatt 2444
|||||| ||||| | ||||||||| | ||| || || || |||||||||||||||||| |
Sbjct: 2 tgctgtgaagttcaggagattgtttcgttctctcacggaccgaaagctgtttgtttcact 61
Query: 2445 ggtttctggattagaacctgatcctgttgatgaagctatgagatatgccagagaggtagt 2504
|||| |||| || |||| ||| | | ||||| ||| | ||||||| ||| || || |
Sbjct: 62 ggttactgggttggaacgtgacaccatcgatgaggctttcagatatggcagggaagttat 121
Query: 2505 ggagtgggaaaaatgggatccctct 2529
|||||||||||||||||||||||||
Sbjct: 122 ggagtgggaaaaatgggatccctct 146
>gnl|LJGI|TC74866 similar to UniRef100_A7R2S0 Cluster: Chromosome undetermined
scaffold_444, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_444, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(48%)
Length = 1825
Score = 69.9 bits (35), Expect = 8e-11
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 1687 gatgcaatatttccagctgctgcacgtgagtatgcaccactggtggaggagttgtggagg 1746
||||| || |||||||||||| | ||||| |||||||||||| | |||||||||||||
Sbjct: 480 gatgctatctttccagctgctactcgtgaatatgcaccactgattgaggagttgtggaac 539
Query: 1747 gatccagccattcaggccacata 1769
||| ||| |||| ||||||||||
Sbjct: 540 gatgcagtcattaaggccacata 562
>gnl|LJGI|TC63677 weakly similar to UniRef100_A9V608 Cluster: Predicted protein; n=1;
Monosiga brevicollis MX1|Rep: Predicted protein -
Monosiga brevicollis MX1, partial (16%)
Length = 729
Score = 60.0 bits (30), Expect = 7e-08
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 70 agctatgagtactcctttgcagaggagtacaaaggccctcctatcagatactccattcct 129
|||||||||||||| ||||| || |||||| ||||||||| |||| |||||||| |||
Sbjct: 380 agctatgagtactcttttgccttggtgtacaatggccctcctctcagttactccatccct 439
Query: 130 gaagcacctcctttcaaccttgataaaatcccacttgc 167
|||| ||| ||||||| |||| |||||||| ||||
Sbjct: 440 gaagtccctgctttcaaaattgaccaaatcccaattgc 477
>gnl|LJGI|BP063658 weakly similar to UniRef100_A7P979 Cluster: Chromosome chr3
scaffold_8, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr3 scaffold_8, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 468
Score = 58.0 bits (29), Expect = 3e-07
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1435 ttctctgaaaatgagcgccaaagtatcaagttggtgatccaaagcaacttgtataggtac 1494
|||||||||||||||| || || ||||||||||||||||| | ||||| ||| || |||
Sbjct: 288 ttctctgaaaatgagctcccaaatatcaagttggtgatcccatgcaacctgtttacctac 229
Query: 1495 attggtatcctgctgga 1511
| ||||| ||||||||
Sbjct: 228 ctcggtatactgctgga 212