Miyakogusa Predicted Gene
- Lj3g3v3336120.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3336120.1 Non Chatacterized Hit- tr|I1LJM2|I1LJM2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37576 PE,78.59,0,no
description,NULL; coiled-coil,NULL; AARP2CN (NUC121) domain,AARP2CN;
seg,NULL; DUF663,Ribosome bi,CUFF.45627.1
(3069 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77658 similar to UniRef100_A7QHJ9 Cluster: Chromosome... 1013 0.0
gnl|LJGI|TC76619 similar to UniRef100_A7QHJ9 Cluster: Chromosome... 918 0.0
gnl|LJGI|TC74884 similar to UniRef100_A7QHJ9 Cluster: Chromosome... 234 3e-60
gnl|LJGI|TC69126 homologue to UniRef100_A7QHJ9 Cluster: Chromoso... 161 3e-38
>gnl|LJGI|TC77658 similar to UniRef100_A7QHJ9 Cluster: Chromosome chr5 scaffold_98,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_98, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 544
Score = 1013 bits (511), Expect = 0.0
Identities = 537/545 (98%), Gaps = 1/545 (0%)
Strand = Plus / Plus
Query: 190 ggaaagtatgtcaagcgtgaagttcacaatcttgctcgatttatttcggtcatgaagttt 249
||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||
Sbjct: 1 ggaaagtatgtcaagcgtgaantg-acaatcttgctcgatttatatcggtcatgaagttt 59
Query: 250 catcctttatcttggagaacttcccacccttatgttttggcagatcgttttgaagatatc 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 catcctttatcttggagaacttcccacccttatgttttggcagatcgttttgaagatatc 119
Query: 310 actcctcctgaaaaagtgcattcaaataataaatgtgatagaaaaatcacactttatggt 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 actcctcctgaaaaagtgcattcaaataataaatgtgatagaaaaatcacactttatggt 179
Query: 370 tatctcagaggctgtaatttgaaaaagggcaataaggtgcacatagctggggtcggtgat 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tatctcagaggctgtaatttgaaaaagggcaataaggtgcacatagctggggtcggtgat 239
Query: 430 tatagtttagctggtgttactgctttacctgatccatgtcctcttccatctgctgccaaa 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tatagtttagctggtgttactgctttacctgatccatgtcctcttccatctgctgccaaa 299
Query: 490 aagaagggactgcgtgataaggagaaattattctatgctccaatgtctggccttggggat 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aagaagggactgcgtgataaggagaaattattctatgctccaatgtctggccttggggat 359
Query: 550 ctcttgtacgacaaagatgctgtatacataaatattaatgatcactttgttcaattctca 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 360 ctcttgtacgacaaagatgctgtatacataaatattaatgatcactttgttcaattcaca 419
Query: 610 aaagtggatgatgaaaactctgctattacgagaaaaggaaatgaaagagatataggagaa 669
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 420 aaagttgatgatgaaaactctgatattacgagaaaaggaaatgaaagagatataggagaa 479
Query: 670 gttttggtgagatcgcttcaggaaaccaagtacccaatcaatgaaaagctggagaatagc 729
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 480 gttttggtgagatcgcttcaggaaaccaagtacccaatcaatgaaaagctggagaatanc 539
Query: 730 atgat 734
|||||
Sbjct: 540 atgat 544
>gnl|LJGI|TC76619 similar to UniRef100_A7QHJ9 Cluster: Chromosome chr5 scaffold_98,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_98, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 515
Score = 918 bits (463), Expect = 0.0
Identities = 499/512 (97%), Gaps = 1/512 (0%)
Strand = Plus / Plus
Query: 2181 cggaatagtcgctgttcagaatttatcaaacaatcaggcaacatttaggattactgcaac 2240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cggaatagtcgctgttcagaatttatcaaacaatcaggcaacatttaggattactgcaac 60
Query: 2241 tgcagttgtacttgagtttaatcatgcagcaaggatagtgnnnnnnntcaaattggtcgg 2300
|||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 61 tgcagttgtacttgagtttaatcatgcagcaaggatagtgaaaaaaataaaattggtcgg 120
Query: 2301 -ttacccatgcaagatattcaagaagacagctcttatcaaggaaatgtttacttcggatc 2359
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 121 gttacccatgcaagatattcaagaagacagctctaatcaaggaaatgtttacttcggatc 180
Query: 2360 ttgaaatagctcggtttgaaggtgcggccattcgaacagtcagtgggataagggggcagg 2419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgaaatagctcggtttgaaggtgcggccattcgaacagtcagtgggataagggggcagg 240
Query: 2420 tcaagaaggctgcaaaagaagagataggtaaccaaccaaaaaggaagggtgggataacca 2479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcaagaaggctgcaaaagaagagataggtaaccaaccaaaaaggaagggtgggataacca 300
Query: 2480 aagaaggaattgctaggtgcacctttgaggacaaaattttgatgagtgacattgttttcc 2539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagaaggaattgctaggtgcacctttgaggacaaaattttgatgagtgacattgttttcc 360
Query: 2540 tgcgtgcatggactcaagttgaagttcctcagttctataatctgttgacaacggcactgc 2599
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 361 tgcgtgcatggactcaagttgaagttcctcagttctataatccattgacaacggcattgc 420
Query: 2600 agcctcgtgaccagacctggaaaggaatgagaactgttgcagaattgagaagagaccacg 2659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agcctcgtgaccagacctggaaaggaatgagaactgttgcagaattgagaagagaccacg 480
Query: 2660 atcttcctgtgcctgtaaacaaagattctctt 2691
||||||||||||||||||||||||||||||||
Sbjct: 481 atcttcctgtgcctgtaaacaaagattctctt 512
>gnl|LJGI|TC74884 similar to UniRef100_A7QHJ9 Cluster: Chromosome chr5 scaffold_98,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_98, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 597
Score = 234 bits (118), Expect = 3e-60
Identities = 124/126 (98%)
Strand = Plus / Plus
Query: 2784 ggagacacccaagcgaaaccagccattacttgaacagagaaggcaaaagggtgttgtcat 2843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggagacacccaagcgaaaccagccattacttgaacagagaaggcaaaagggtgttgtcat 60
Query: 2844 ggaacctcgtgagcgaaaagttcttgctcttgttcagcacatccagttaataaatcatga 2903
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggaacctcgcgagcgaaaagttcttgctcttgttcagcacatccagttaataaatcatga 120
Query: 2904 caagat 2909
| ||||
Sbjct: 121 cgagat 126
Score = 93.7 bits (47), Expect = 6e-18
Identities = 50/51 (98%)
Strand = Plus / Plus
Query: 3019 taccggacacaagacaagtcgagtaagaaaatgcggagatcagaggcttga 3069
||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 taccgaacacaagacaagtcgagtaagaaaatgcggagatcagaggcttga 286
>gnl|LJGI|TC69126 homologue to UniRef100_A7QHJ9 Cluster: Chromosome chr5 scaffold_98,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_98, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 649
Score = 161 bits (81), Expect = 3e-38
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 1 atggaaacatttgagttccttaatattttgcaagttcacgggttcccgaaagtcatgggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 atggaaacatttgagttccttaatattttgcaagttcacgggttcccgaaagtcatgggg 628
Query: 61 gttcttacacatcttgataaa 81
|||||||||||||||||||||
Sbjct: 629 gttcttacacatcttgataaa 649