Miyakogusa Predicted Gene
- Lj3g3v3336110.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v3336110.1 Non Chatacterized Hit- tr|I1NPY2|I1NPY2_ORYGL
Uncharacterized protein (Fragment) OS=Oryza
glaberrima,27.25,2e-18,seg,NULL,CUFF.45583.1
(1851 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS343174 weakly similar to UniRef100_Q9FM45 Cluster: Ar... 1080 0.0
gnl|LJGI|AV769410 weakly similar to UniRef100_Q9C247 Cluster: Re... 458 e-128
gnl|LJGI|AV408968 weakly similar to UniRef100_A7QAM5 Cluster: Ch... 391 e-107
>gnl|LJGI|FS343174 weakly similar to UniRef100_Q9FM45 Cluster: Arabidopsis thaliana
genomic DNA chromosome 5 P1 clone:MNF13; n=3;
Arabidopsis thaliana|, partial (3%)
Length = 628
Score = 1080 bits (545), Expect = 0.0
Identities = 545/545 (100%)
Strand = Plus / Plus
Query: 1 atgaaatttcttagaaacgatgcccgaacaatcgtgtcgcatcttaaacgccaagagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 atgaaatttcttagaaacgatgcccgaacaatcgtgtcgcatcttaaacgccaagagaaa 143
Query: 61 cagattaaacttaagaggaggtggttattgggcattccttccacaaaatctgagaggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 cagattaaacttaagaggaggtggttattgggcattccttccacaaaatctgagaggaag 203
Query: 121 aagttggacaagattttcaaaaatagctatatgcctgaatctatactcagggaagatgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 aagttggacaagattttcaaaaatagctatatgcctgaatctatactcagggaagatgat 263
Query: 181 atattttatgagtcagtgagaactcatgttgaaggtgcccttggagcacaaagcattgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atattttatgagtcagtgagaactcatgttgaaggtgcccttggagcacaaagcattgaa 323
Query: 241 agagagaatcatgttccattggatgatatgcatttgacgcaagtatcggatatgaaaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agagagaatcatgttccattggatgatatgcatttgacgcaagtatcggatatgaaaagg 383
Query: 301 ttgatattatcgtgccttaacaaattgaccaccaagggtctacaccgtcttgctatgata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttgatattatcgtgccttaacaaattgaccaccaagggtctacaccgtcttgctatgata 443
Query: 361 gttactggtggctcaatcgagtctgtgataactcgtggcaatttgaaaatgattatcaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gttactggtggctcaatcgagtctgtgataactcgtggcaatttgaaaatgattatcaag 503
Query: 421 ggttctctttcaagtgttctgagtagcaaaagcgataaccatcagcaaagggaaactcgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggttctctttcaagtgttctgagtagcaaaagcgataaccatcagcaaagggaaactcgt 563
Query: 481 ggacagctttttcaacttctcagcgatccacagcattttcgagataggtctgggcctttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggacagctttttcaacttctcagcgatccacagcattttcgagataggtctgggcctttg 623
Query: 541 cctga 545
|||||
Sbjct: 624 cctga 628
>gnl|LJGI|AV769410 weakly similar to UniRef100_Q9C247 Cluster: Related to a-agglutinin
core protein AGA1; n=1; Neurospora crassa|Rep: Related to
a-agglutinin core protein AGA1 - Neurospora crassa,
partial (5%)
Length = 405
Score = 458 bits (231), Expect = e-128
Identities = 231/231 (100%)
Strand = Plus / Minus
Query: 1621 gcaggtcatatgttggaggagtttgccataactgaaggccgagatttaaactcgagcagt 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gcaggtcatatgttggaggagtttgccataactgaaggccgagatttaaactcgagcagt 346
Query: 1681 actttatacctcagtggtgataatcaaattgaagatcgggaagaaataaaagaaccgtca 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 actttatacctcagtggtgataatcaaattgaagatcgggaagaaataaaagaaccgtca 286
Query: 1741 tcatttgggaaacatacaatgtattcaacagttgctcgaatagttaaagagctgagtcct 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tcatttgggaaacatacaatgtattcaacagttgctcgaatagttaaagagctgagtcct 226
Query: 1801 tcctttccagacagaagcatggagagactgaagatgttgatgagcttatga 1851
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tcctttccagacagaagcatggagagactgaagatgttgatgagcttatga 175
>gnl|LJGI|AV408968 weakly similar to UniRef100_A7QAM5 Cluster: Chromosome chr5
scaffold_72, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_72, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 197
Score = 391 bits (197), Expect = e-107
Identities = 197/197 (100%)
Strand = Plus / Plus
Query: 665 ctcagttacaaccctgcaaacatggatgggatagggaccatctaatgaagctagtgaata 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctcagttacaaccctgcaaacatggatgggatagggaccatctaatgaagctagtgaata 60
Query: 725 atatgagtaggaagatgctttcacaacatgatagaggaaatgagctacaggagccattag 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atatgagtaggaagatgctttcacaacatgatagaggaaatgagctacaggagccattag 120
Query: 785 ctaaagccatggcagtagcagacttatcgctacaagtgacaaatggtgatcgcagcatat 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctaaagccatggcagtagcagacttatcgctacaagtgacaaatggtgatcgcagcatat 180
Query: 845 tttcagaagaattttat 861
|||||||||||||||||
Sbjct: 181 tttcagaagaattttat 197