Miyakogusa Predicted Gene

Lj3g3v3326050.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3326050.1 Non Chatacterized Hit- tr|I1LJN1|I1LJN1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41563
PE,77.31,0,DUF936,Protein of unknown function DUF936, plant; FAMILY
NOT NAMED,NULL; seg,NULL,CUFF.45575.1
         (2247 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS320619 similar to UniRef100_Q0J0C7 Cluster: Os09g0516...  1142   0.0  
gnl|LJGI|TC81786 similar to UniRef100_A9U357 Cluster: Predicted ...   686   0.0  

>gnl|LJGI|FS320619 similar to UniRef100_Q0J0C7 Cluster: Os09g0516700 protein; n=1;
           Oryza sativa Japonica Group|Rep: Os09g0516700 protein -
           Oryza sativa subsp. japonica (Rice), partial (28%)
          Length = 795

 Score = 1142 bits (576), Expect = 0.0
 Identities = 576/576 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcaaatcttgtacctggggttcttctcaagcttatgcagcacatgaacactgatgtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 atggcaaatcttgtacctggggttcttctcaagcttatgcagcacatgaacactgatgtg 279

                                                                       
Query: 61  aaagttgccggtgagcacaggtcatcactgttgcaagtggtgagcattgttccagcactt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 aaagttgccggtgagcacaggtcatcactgttgcaagtggtgagcattgttccagcactt 339

                                                                       
Query: 121 gcaggtggagaactgttctcaaatcaaggcttttatctcaaggtttctgattcctcacac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gcaggtggagaactgttctcaaatcaaggcttttatctcaaggtttctgattcctcacac 399

                                                                       
Query: 181 gccacctatgtctctctccctgatgaacaggatgatctcatcctgagtgacaagattcag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gccacctatgtctctctccctgatgaacaggatgatctcatcctgagtgacaagattcag 459

                                                                       
Query: 241 ctaggccagtttgtgtttgttgatcggttggaggcggcttcgccggttccgattcttcat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ctaggccagtttgtgtttgttgatcggttggaggcggcttcgccggttccgattcttcat 519

                                                                       
Query: 301 ggggttaggcctgttcctgggagacacgcttgtgttggaacccctgaagatattgttgca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ggggttaggcctgttcctgggagacacgcttgtgttggaacccctgaagatattgttgca 579

                                                                       
Query: 361 actcgctcattgggattccttagtaataatactaattcccaagttaacaagaacagtgtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 actcgctcattgggattccttagtaataatactaattcccaagttaacaagaacagtgtt 639

                                                                       
Query: 421 ttttctggtaacaaggacttagagaggtcaaagtctccaagggtagtgttggggaatcat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 ttttctggtaacaaggacttagagaggtcaaagtctccaagggtagtgttggggaatcat 699

                                                                       
Query: 481 aaggagaagaaggagaaagtgagattgaatggtggtggcggtgctcatgaagaaccattt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 aaggagaagaaggagaaagtgagattgaatggtggtggcggtgctcatgaagaaccattt 759

                                               
Query: 541 gaaaagaaatctgttgtttttgctaaatgtaaatct 576
           ||||||||||||||||||||||||||||||||||||
Sbjct: 760 gaaaagaaatctgttgtttttgctaaatgtaaatct 795


>gnl|LJGI|TC81786 similar to UniRef100_A9U357 Cluster: Predicted protein; n=1;
            Physcomitrella patens subsp. patens|Rep: Predicted
            protein - Physcomitrella patens subsp. patens, partial
            (5%)
          Length = 721

 Score =  686 bits (346), Expect = 0.0
 Identities = 349/350 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1898 atgaagtggttaatttggctgacatgctgcaattgcgatcgcgagactggtttttgttat 1957
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    atgaagtggtcaatttggctgacatgctgcaattgcgatcgcgagactggtttttgttat 60

                                                                        
Query: 1958 ttgttgagaaattcctggacactgatggggataatactggtttgtcaaacaatggccaaa 2017
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ttgttgagaaattcctggacactgatggggataatactggtttgtcaaacaatggccaaa 120

                                                                        
Query: 2018 tagcaggcatgctcagtcaactaaaaagtgtaaatgattggttggatgagataggttcaa 2077
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  tagcaggcatgctcagtcaactaaaaagtgtaaatgattggttggatgagataggttcaa 180

                                                                        
Query: 2078 gcaagaatgagggagaatcgtgtcagataccggcagagacgattgaccagctcagaaaga 2137
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  gcaagaatgagggagaatcgtgtcagataccggcagagacgattgaccagctcagaaaga 240

                                                                        
Query: 2138 agatatatgagtatcttcttactcatgttgaatctgctgctgctgcactcagtggtggat 2197
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  agatatatgagtatcttcttactcatgttgaatctgctgctgctgcactcagtggtggat 300

                                                              
Query: 2198 cacagtcattacctcagattcaaacaactgagattaaaggcaaaaggtga 2247
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  cacagtcattacctcagattcaaacaactgagattaaaggcaaaaggtga 350