Miyakogusa Predicted Gene

Lj3g3v3314940.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3314940.1 Non Chatacterized Hit- tr|I1ND38|I1ND38_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,31.58,0.0000000000004,PPR,Pentatricopeptide repeat; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; PPR: pentatricopeptid,CUFF.45562.1
         (521 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82170 weakly similar to UniRef100_A7P9F5 Cluster: Chr...   196   1e-49
gnl|LJGI|TC60576 similar to UniRef100_A7P9F5 Cluster: Chromosome...   161   5e-39
gnl|LJGI|TC68987 similar to UniRef100_Q6ILL4 Cluster: HDC09080; ...   155   3e-37
gnl|LJGI|TC62621                                                       58   6e-08

>gnl|LJGI|TC82170 weakly similar to UniRef100_A7P9F5 Cluster: Chromosome chr3
           scaffold_8, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr3 scaffold_8, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (17%)
          Length = 832

 Score =  196 bits (99), Expect = 1e-49
 Identities = 183/211 (86%)
 Strand = Plus / Plus

                                                                       
Query: 311 ctctgatagagaactgcactaataatgaatttatgagtttggtagagcttgtcaaaggtt 370
           |||||||||||||||||| |||||||||||||| |||| |||||| ||||||||||||||
Sbjct: 152 ctctgatagagaactgcagtaataatgaatttaagagtgtggtagggcttgtcaaaggtt 211

                                                                       
Query: 371 tccagaagagggatttagtgaatgaagcagccagtgttttaaacacaatgcttcagggga 430
           ||   | ||||| ||||||||||||||| ||||| | |     ||||||| || ||||||
Sbjct: 212 tcggaatgaggggtttagtgaatgaagccgccagagctcgtgtcacaatgtttgagggga 271

                                                                       
Query: 431 attataagccagatggagcagtttataatttattaattgttgaacattgtagtcttcgta 490
           ||||||||||||||||||| |||||||||||||||||  ||||||||| |||   |||||
Sbjct: 272 attataagccagatggagccgtttataatttattaatatttgaacattctagatgtcgta 331

                                          
Query: 491 atgttgataaggcgtataatatgtacatgga 521
           ||||| ||||||||||| |||||||||||||
Sbjct: 332 atgttcataaggcgtatgatatgtacatgga 362



 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                    
Query: 208 aatggacttgataagaaagctaggacaagagaagctaagga 248
           ||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 55  aatggacttaataagaaagctaggacaagggaagctaagga 95


>gnl|LJGI|TC60576 similar to UniRef100_A7P9F5 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (5%)
          Length = 914

 Score =  161 bits (81), Expect = 5e-39
 Identities = 177/209 (84%)
 Strand = Plus / Plus

                                                                       
Query: 309 tactctgatagagaactgcactaataatgaatttatgagtttggtagagcttgtcaaagg 368
           |||||||||||||||||||| |||||||||||| | |||| ||||||  |||||||||||
Sbjct: 37  tactctgatagagaactgcagtaataatgaattcaagagtgtggtaggacttgtcaaagg 96

                                                                       
Query: 369 tttccagaagagggatttagtgaatgaagcagccagtgttttaaacacaatgcttcaggg 428
           ||||   ||||||| ||||  ||||||||||||||| | |    ||||||||||||| ||
Sbjct: 97  tttcatcaagaggggtttacagaatgaagcagccagagctcatgacacaatgcttcacgg 156

                                                                       
Query: 429 gaattataagccagatggagcagtttataatttattaattgttgaacattgtagtcttcg 488
           ||||||||||||||||||||||||||||||||| |||||  ||   |||| |||    | 
Sbjct: 157 gaattataagccagatggagcagtttataatttgttaatatttagtcattctagaagcct 216

                                        
Query: 489 taatgttgataaggcgtataatatgtaca 517
           ||||||||||||||| |||||||||||||
Sbjct: 217 taatgttgataaggcatataatatgtaca 245


>gnl|LJGI|TC68987 similar to UniRef100_Q6ILL4 Cluster: HDC09080; n=1; Drosophila
           melanogaster|Rep: HDC09080 - Drosophila melanogaster
           (Fruit fly), partial (10%)
          Length = 813

 Score =  155 bits (78), Expect = 3e-37
 Identities = 174/206 (84%)
 Strand = Plus / Plus

                                                                       
Query: 312 tctgatagagaactgcactaataatgaatttatgagtttggtagagcttgtcaaaggttt 371
           ||||||||||||||||| ||||||||| |||| |||| |||||| |||| ||||||||||
Sbjct: 19  tctgatagagaactgcagtaataatgattttaggagtgtggtagggcttatcaaaggttt 78

                                                                       
Query: 372 ccagaagagggatttagtgaatgaagcagccagtgttttaaacacaatgcttcaggggaa 431
           ||  | ||||||||||||| ||||||||||||| | |    ||||||||||| |||||||
Sbjct: 79  cctcacgagggatttagtgtatgaagcagccagagctcatgacacaatgcttgaggggaa 138

                                                                       
Query: 432 ttataagccagatggagcagtttataatttattaattgttgaacattgtagtcttcgtaa 491
           |||||||| ||| || |||||||||||| |||||||   ||| ||||||||   | ||||
Sbjct: 139 ttataagctagagggggcagtttataatgtattaatatatgatcattgtagatctggtaa 198

                                     
Query: 492 tgttgataaggcgtataatatgtaca 517
           ||||  |||||||||| |||||||||
Sbjct: 199 tgtttgtaaggcgtatgatatgtaca 224


>gnl|LJGI|TC62621 
          Length = 736

 Score = 58.0 bits (29), Expect = 6e-08
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 435 taagccagatggagcagtttataatttattaat 467
           |||||||||||||||||| ||||||||||||||
Sbjct: 113 taagccagatggagcagtctataatttattaat 145