Miyakogusa Predicted Gene

Lj3g3v3312780.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v3312780.1 Non Chatacterized Hit- tr|B9T798|B9T798_RICCO
Endonuclease III, putative OS=Ricinus communis
GN=RCOM,41.3,0.4,seg,NULL,CUFF.45546.1
         (327 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS344849 similar to UniRef100_A7QM58 Cluster: Chromosom...   642   0.0  

>gnl|LJGI|FS344849 similar to UniRef100_A7QM58 Cluster: Chromosome chr5 scaffold_124,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_124, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (45%)
          Length = 775

 Score =  642 bits (324), Expect = 0.0
 Identities = 324/324 (100%)
 Strand = Plus / Plus

                                                                       
Query: 3   gttggtcgtttccgctcctcctcccttgtctggtttgaggagaatccaagctttgatcat 62
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gttggtcgtttccgctcctcctcccttgtctggtttgaggagaatccaagctttgatcat 60

                                                                       
Query: 63  gtctgagacaccacgacgatcttacaaagcttctctcagcaataccaacacacccacctc 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gtctgagacaccacgacgatcttacaaagcttctctcagcaataccaacacacccacctc 120

                                                                       
Query: 123 gcttgttgaaggctctgattcctccaacgccgcttcttcagtgtcccaacttcgtgtctt 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcttgttgaaggctctgattcctccaacgccgcttcttcagtgtcccaacttcgtgtctt 180

                                                                       
Query: 183 tgtgagaaaaaacaagagacccagaaaaatgactatggaacttcaacaaaaggagcctcc 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtgagaaaaaacaagagacccagaaaaatgactatggaacttcaacaaaaggagcctcc 240

                                                                       
Query: 243 tccaccaacccaggaccataaaaagcttggtccacctgaaattgaagactttgcatacag 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tccaccaacccaggaccataaaaagcttggtccacctgaaattgaagactttgcatacag 300

                                   
Query: 303 tggagcaaatgtggctgagtgcag 326
           ||||||||||||||||||||||||
Sbjct: 301 tggagcaaatgtggctgagtgcag 324